RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ERASQ7Z444 233 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 C14orf178Q8N769 122 aaPredicted RBP3.28□□□□□ -1.88
PABPC1-212ENST00000519622 NEXN-AS1Q8NBZ9 246 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 UBE2E2Q96LR5 201 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 AMELXQ99217 191 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 FOXC2Q99958 501 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 C20orf78Q9BR46 151 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 DPH3P1Q9H4G8 78 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 MRPL35Q9NZE8 188 aaKnown RBP3.28□□□□□ -1.88
PABPC1-212ENST00000519622 MDFICQ9P1T7 246 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 PEMTQ9UBM1 199 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 UFC1Q9Y3C8 167 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 DOPEY2Q9Y3R5 2298 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 CUBNO60494 3623 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 TEX15Q9BXT5 2789 aa3.28□□□□□ -1.89
PABPC1-212ENST00000519622 MAP1AP78559 2803 aaPredicted RBP3.27□□□□□ -1.89
PABPC1-212ENST00000519622 TRBV7-3A0A075B6L6 115 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 TRAV12-2A0A075B6T6 113 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 A0A087WX48 190 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 TRAV2A0A0B4J234 112 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 IGIPA6NJ69 53 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 INAFM1C9JVW0 142 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 M0QY20 66 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 SIVA1O15304 175 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 DUSP14O95147 198 aaKnown RBP3.27□□□□□ -1.89
PABPC1-212ENST00000519622 P0DMU3 169 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 FAM231AP0DMU4 169 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 FAM231CP0DMU5 169 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 FXYD2P54710 66 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 TCTAP57738 103 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 LAGE3Q14657 143 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 TMEM97Q5BJF2 176 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 PSMG4Q5JS54 123 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 DUX5Q96PT3 197 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 SPAG8Q99932 426 aaPredicted RBP3.27□□□□□ -1.89
PABPC1-212ENST00000519622 EDA2RQ9HAV5 297 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 HIGD1BQ9P298 99 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 TIMM8BQ9Y5J9 83 aaPredicted RBP3.27□□□□□ -1.89
PABPC1-212ENST00000519622 EPG5Q9HCE0 2579 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 FAM208BQ5VWN6 2430 aa3.27□□□□□ -1.89
PABPC1-212ENST00000519622 NAV2Q8IVL1 2488 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 TRAV12-3A0A0B4J271 114 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 TRBV27A0A0K0K1C4 114 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 KNCNA6PVL3 124 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 F8VRH5 84 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 LINC01619G3V211 115 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 H3BMM0 161 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 ATP5LO75964 103 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 DPM2O94777 84 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 IGKCP01834 107 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 TSPEAR-AS2P59090 65 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 HSD52Q0P140 79 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 UBE2V1Q13404 147 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 ZC2HC1BQ5TFG8 222 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 SAMD13Q5VXD3 122 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 FOXI2Q6ZQN5 318 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 GTSCR1Q86UQ5 136 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 TMEM61Q8N0U2 210 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 C11orf72Q8NBR9 251 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 OR5A1Q8NGJ0 315 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 OR9G4Q8NGQ1 327 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 RNASE8Q8TDE3 154 aaKnown RBP3.26□□□□□ -1.89
PABPC1-212ENST00000519622 C4orf3Q8WVX3 66 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 RNF183Q96D59 192 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 AP1S3Q96PC3 154 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 DUX3Q96PT4 197 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 LINC00467Q9BRT7 94 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 Q9UF83 564 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 CREBBPQ92793 2442 aa3.26□□□□□ -1.89
PABPC1-212ENST00000519622 TRBV25-1A0A075B6N4 114 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 IGHV1OR15-1A0A075B7D0 117 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 A0A1B0GWB2 263 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 C11orf86A6NJI1 115 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 K7EMI3 77 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 PRM2P04554 102 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 MGPP08493 103 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 GIG44P09565 113 aaPredicted RBP3.25□□□□□ -1.89
PABPC1-212ENST00000519622 RBX1P62877 108 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 SEC11AP67812 179 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 NSUN5P1Q3KNT7 163 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 C2orf66Q6UXQ4 117 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 C12orf54Q6X4T0 127 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 ZFP2Q6ZN57 461 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 TMEM86BQ8N661 226 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 PRR26Q8N8Z3 221 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 DLX4Q92988 240 aaPredicted RBP3.25□□□□□ -1.89
PABPC1-212ENST00000519622 PTH2Q96A98 100 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 CHAC1Q9BUX1 264 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 CSTL1Q9H114 145 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 PHLDA3Q9Y5J5 127 aa3.25□□□□□ -1.89
PABPC1-212ENST00000519622 FLNAP21333 2647 aaKnown RBP3.24□□□□□ -1.89
PABPC1-212ENST00000519622 GAGE10A6NGK3 116 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 E9PLD3 99 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 H3BRM9 83 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 K7ERJ3 54 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms