RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 BEAN1Q3B7T3 259 aa10.06□□□□□ -0.8
PABPC1-208ENST00000519004 VMO1Q7Z5L0 202 aa10.06□□□□□ -0.8
PABPC1-208ENST00000519004 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
PABPC1-208ENST00000519004 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 C20orf173Q96LM9 149 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 LINC00477Q96M19 166 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 DYNLRB1Q9NP97 96 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 MUC4Q99102 2169 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 M0R1W7 72 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 COX7A2LO14548 114 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 NUP37Q8NFH4 326 aa10.05□□□□□ -0.8
PABPC1-208ENST00000519004 IGLV4-3A0A075B6K6 122 aa10.04□□□□□ -0.8
PABPC1-208ENST00000519004 CSMD1Q96PZ7 3565 aa10.04□□□□□ -0.8
PABPC1-208ENST00000519004 TRBV6-5A0A0K0K1A5 114 aa10.04□□□□□ -0.8
PABPC1-208ENST00000519004 MALP21145 153 aa10.03□□□□□ -0.8
PABPC1-208ENST00000519004 KLRB1Q12918 225 aa10.03□□□□□ -0.8
PABPC1-208ENST00000519004 ITLN2Q8WWU7 325 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-208ENST00000519004 A0A087WWL8 130 aa10.03□□□□□ -0.8
PABPC1-208ENST00000519004 IGHV1-58A0A0C4DH39 117 aa10.03□□□□□ -0.8
PABPC1-208ENST00000519004 BAALC-AS2P0C853 105 aa10.03□□□□□ -0.8
PABPC1-208ENST00000519004 MBD3L2Q8NHZ7 208 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-208ENST00000519004 C10orf105Q8TEF2 133 aa10.03□□□□□ -0.8
PABPC1-208ENST00000519004 DMXL2Q8TDJ6 3036 aa10.02□□□□□ -0.8
PABPC1-208ENST00000519004 PRRC2AP48634 2157 aaKnown RBP10.02□□□□□ -0.8
PABPC1-208ENST00000519004 F8WDY8 70 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 J3QLI3 93 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 RS1O15537 224 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 A8MZ25 164 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 F5H697 171 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
PABPC1-208ENST00000519004 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 C16orf92Q96LL3 132 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 PRO0628Q9UI54 55 aa10.02□□□□□ -0.81
PABPC1-208ENST00000519004 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
PABPC1-208ENST00000519004 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
PABPC1-208ENST00000519004 A0A087WVE0 104 aa10□□□□□ -0.81
PABPC1-208ENST00000519004 DEFB1P60022 68 aa10□□□□□ -0.81
PABPC1-208ENST00000519004 MRPS36P82909 103 aaKnown RBP10□□□□□ -0.81
PABPC1-208ENST00000519004 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 TIMM17BO60830 172 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 FAM27E3Q08E93 113 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 FHL2Q14192 279 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 C15orf32Q32M92 178 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 VSIG2Q96IQ7 327 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 PFN2P35080 140 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 LINC00336Q6ZUF6 198 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 U3KQE9 123 aa9.99□□□□□ -0.81
PABPC1-208ENST00000519004 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
PABPC1-208ENST00000519004 RPL11P62913 178 aaKnown RBP9.98□□□□□ -0.81
PABPC1-208ENST00000519004 Q6JHZ5 121 aa9.98□□□□□ -0.81
PABPC1-208ENST00000519004 C9orf139Q6ZV77 190 aa9.98□□□□□ -0.81
PABPC1-208ENST00000519004 Q8N2B8 174 aa9.98□□□□□ -0.81
PABPC1-208ENST00000519004 APRG1Q8IVJ8 170 aa9.98□□□□□ -0.81
PABPC1-208ENST00000519004 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
PABPC1-208ENST00000519004 FAM218AQ96MZ4 157 aa9.97□□□□□ -0.81
PABPC1-208ENST00000519004 DPM3Q9P2X0 92 aa9.97□□□□□ -0.81
PABPC1-208ENST00000519004 M0QY20 66 aa9.96□□□□□ -0.81
PABPC1-208ENST00000519004 CLEC19AQ6UXS0 136 aa9.96□□□□□ -0.81
PABPC1-208ENST00000519004 MGAQ8IWI9 3026 aa9.96□□□□□ -0.81
PABPC1-208ENST00000519004 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
PABPC1-208ENST00000519004 IGHV7-81A0A0B4J1V7 117 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 NACAE9PAV3 2078 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 FAM223BA6NKX1 122 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 NDUFC2-KCTD14E9PQ53 114 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 CD28P10747 220 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 FAM215AQ9Y5M1 114 aa9.95□□□□□ -0.82
PABPC1-208ENST00000519004 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
PABPC1-208ENST00000519004 ASPMQ8IZT6 3477 aa9.94□□□□□ -0.82
PABPC1-208ENST00000519004 F6UB75 175 aa9.94□□□□□ -0.82
PABPC1-208ENST00000519004 PRIMA1Q86XR5 153 aa9.94□□□□□ -0.82
PABPC1-208ENST00000519004 FAM110DQ8TAY7 271 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-208ENST00000519004 RNASE6Q93091 150 aaKnown RBP9.94□□□□□ -0.82
PABPC1-208ENST00000519004 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
PABPC1-208ENST00000519004 ROS1P08922 2347 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 Q8N6K4 173 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 LINC00846Q9NV44 126 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 WNK2Q9Y3S1 2297 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 SOCS3O14543 225 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 NDUFC2O95298 119 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 DNAL4O96015 105 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 RPL35AP18077 110 aaKnown RBP9.93□□□□□ -0.82
PABPC1-208ENST00000519004 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
PABPC1-208ENST00000519004 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 LY6G5BQ8NDX9 201 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 LOC400499M0QZD8 3231 aa9.93□□□□□ -0.82
PABPC1-208ENST00000519004 BSPH1Q075Z2 132 aa9.92□□□□□ -0.82
PABPC1-208ENST00000519004 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
PABPC1-208ENST00000519004 Q9HAA7 133 aa9.92□□□□□ -0.82
PABPC1-208ENST00000519004 KLK9Q2XQG4 91 aa9.92□□□□□ -0.82
PABPC1-208ENST00000519004 KLK9Q9UKQ9 250 aa9.92□□□□□ -0.82
PABPC1-208ENST00000519004 NDUFA1O15239 70 aa9.91□□□□□ -0.82
PABPC1-208ENST00000519004 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
PABPC1-208ENST00000519004 C9orf85Q96MD7 179 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms