RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZNF462Q96JM2 2506 aa0.59□□□□□ -2.32
SQLE-202ENST00000518604 F5P12259 2224 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 ARAP2Q8WZ64 1704 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 CPSF1Q10570 1443 aaKnown RBP0.58□□□□□ -2.32
SQLE-202ENST00000518604 A0A096LNT2 108 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 TCRBV3S1A0A5B6 114 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 ATP6V1G2-DDX39BF2Z307 99 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 LY6G6CO95867 125 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 PIPP12273 146 aaPredicted RBP0.58□□□□□ -2.32
SQLE-202ENST00000518604 GNG4P50150 75 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 CAV3P56539 151 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 RBM3P98179 157 aaKnown RBP0.58□□□□□ -2.32
SQLE-202ENST00000518604 KLKP1Q107X0 134 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 ZNF56Q15929 161 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 C20orf197Q8N268 126 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 PLAC4Q8WY50 150 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 C12orf57Q99622 126 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 RPRMQ9NS64 109 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 GNG8Q9UK08 70 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 IER3IP1Q9Y5U9 82 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 PARP14Q460N5 1801 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 SPHKAPQ2M3C7 1700 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 NWD2Q9ULI1 1742 aa0.58□□□□□ -2.32
SQLE-202ENST00000518604 NRKQ7Z2Y5 1582 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 ASH1LQ9NR48 2969 aaKnown RBP0.57□□□□□ -2.32
SQLE-202ENST00000518604 CC2D2AQ9P2K1 1620 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 PXDNQ92626 1479 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 TRBV10-3A0A0K0K1G6 114 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 SNCGO76070 127 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 S100A1P23297 94 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 CCL8P80075 99 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 WHAMMP3Q1A5X7 153 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 C12orf73Q69YU5 71 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 CYP2G1PQ6ZSU1 146 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 SPTSSBQ8NFR3 76 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 COPS9Q8WXC6 57 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 Q96NJ1 140 aa0.57□□□□□ -2.32
SQLE-202ENST00000518604 TANC1Q9C0D5 1861 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 JMJD1CQ15652 2540 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 HCG22E2RYF7 251 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 APOC4-APOC2K7ER74 178 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 FXYD1O00168 92 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 SNAPC5O75971 98 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 APOC2P02655 101 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 TPPP2P59282 170 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 RPL37P61927 97 aaKnown RBP0.56□□□□□ -2.32
SQLE-202ENST00000518604 PPP3R1P63098 170 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 MRPL54Q6P161 138 aaKnown RBP0.56□□□□□ -2.32
SQLE-202ENST00000518604 ZNF818PQ6ZRF7 136 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 COX7B2Q8TF08 81 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 COA4Q9NYJ1 87 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 LINC00474Q9P2X8 69 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 KDM6BO15054 1643 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 MYH8P13535 1937 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 TET3O43151 1660 aa0.56□□□□□ -2.32
SQLE-202ENST00000518604 PRDM2Q13029 1718 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 MRC2Q9UBG0 1479 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 LOC285556D6RIA3 1793 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 SSC5DA1L4H1 1573 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 TRAV13-2A0A0B4J235 113 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 A0A0D9SG42 100 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 SIX6O95475 246 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 C9orf153Q5TBE3 101 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 C5orf38Q86SI9 138 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 TMEM14BQ9NUH8 114 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 LINC00312Q9Y6C7 94 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 LRRC37A3O60309 1634 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 KTN1Q86UP2 1357 aaKnown RBP0.55□□□□□ -2.32
SQLE-202ENST00000518604 TNS1Q9HBL0 1735 aaKnown RBP0.55□□□□□ -2.32
SQLE-202ENST00000518604 C10orf71Q711Q0 1435 aa0.55□□□□□ -2.32
SQLE-202ENST00000518604 MAPKBP1O60336 1514 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 ZFHX3Q15911 3703 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 TRBV7-1A0A0A6YYK4 115 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 C20orf202A1L168 122 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 IFNA17P01571 189 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 EDDM3BP56851 147 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 FXYD6P3P58550 94 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 SSBP1Q04837 148 aaKnown RBP0.54□□□□□ -2.32
SQLE-202ENST00000518604 HSD52Q0P140 79 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 SPANXDQ9BXN6 97 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 DPH3P1Q9H4G8 78 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 BET1LQ9NYM9 111 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 VPS8Q8N3P4 1428 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
SQLE-202ENST00000518604 DOCK11Q5JSL3 2073 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 ARHGEF5Q12774 1597 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 SMIM6P0DI80 62 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 RBP2P50120 134 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 MRPS10P82664 201 aaKnown RBP0.53□□□□□ -2.32
SQLE-202ENST00000518604 RPL7L1Q6DKI1 246 aaKnown RBP0.53□□□□□ -2.32
SQLE-202ENST00000518604 COMMD6Q7Z4G1 85 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 C4orf33Q8N1A6 199 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 TSLPQ969D9 159 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 PPP3R2Q96LZ3 170 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 TCEAL7Q9BRU2 100 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 PPIP5K1Q6PFW1 1433 aa0.53□□□□□ -2.32
SQLE-202ENST00000518604 MRC1P22897 1456 aa0.53□□□□□ -2.33
SQLE-202ENST00000518604 ZMYM4Q5VZL5 1548 aa0.53□□□□□ -2.33
SQLE-202ENST00000518604 CHD1O14646 1710 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms