RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 C11orf86A6NJI1 115 aa18.51■□□□□ 0.55
SNTB1-202ENST00000517992 VPREB3Q9UKI3 123 aa18.51■□□□□ 0.55
SNTB1-202ENST00000517992 RHOHQ15669 191 aa18.51■□□□□ 0.55
SNTB1-202ENST00000517992 Q8N1Y9 231 aa18.51■□□□□ 0.55
SNTB1-202ENST00000517992 MTURNQ8N3F0 131 aa18.51■□□□□ 0.55
SNTB1-202ENST00000517992 MDFICQ9P1T7 246 aa18.51■□□□□ 0.55
SNTB1-202ENST00000517992 M0QY20 66 aa18.49■□□□□ 0.55
SNTB1-202ENST00000517992 NSUN5P1Q3KNT7 163 aa18.49■□□□□ 0.55
SNTB1-202ENST00000517992 TNFRSF18Q9Y5U5 241 aa18.49■□□□□ 0.55
SNTB1-202ENST00000517992 TRAV12-2A0A075B6T6 113 aa18.49■□□□□ 0.55
SNTB1-202ENST00000517992 SYNJ2BPP57105 145 aa18.49■□□□□ 0.55
SNTB1-202ENST00000517992 MYO9AB2RTY4 2548 aa18.49■□□□□ 0.55
SNTB1-202ENST00000517992 TRPT1Q86TN4 253 aaKnown RBP18.48■□□□□ 0.55
SNTB1-202ENST00000517992 AGRNO00468 2067 aa18.48■□□□□ 0.55
SNTB1-202ENST00000517992 FSHBP01225 129 aa18.48■□□□□ 0.55
SNTB1-202ENST00000517992 CKS1BP61024 79 aa18.48■□□□□ 0.55
SNTB1-202ENST00000517992 RPL39P62891 51 aaKnown RBP18.48■□□□□ 0.55
SNTB1-202ENST00000517992 UBE2E2Q96LR5 201 aa18.48■□□□□ 0.55
SNTB1-202ENST00000517992 ZNF256Q9Y2P7 627 aaPredicted RBP18.48■□□□□ 0.55
SNTB1-202ENST00000517992 F8W1H4 67 aa18.47■□□□□ 0.55
SNTB1-202ENST00000517992 ZNF56Q15929 161 aa18.47■□□□□ 0.55
SNTB1-202ENST00000517992 FAM74A4Q5TZK3 123 aa18.47■□□□□ 0.55
SNTB1-202ENST00000517992 MORN3Q6PF18 240 aaPredicted RBP18.47■□□□□ 0.55
SNTB1-202ENST00000517992 CREBBPQ92793 2442 aa18.47■□□□□ 0.55
SNTB1-202ENST00000517992 SPINK13Q1W4C9 94 aa18.47■□□□□ 0.55
SNTB1-202ENST00000517992 ZNF876PQ49A33 203 aa18.47■□□□□ 0.55
SNTB1-202ENST00000517992 FLNAP21333 2647 aaKnown RBP18.46■□□□□ 0.55
SNTB1-202ENST00000517992 TRGV11A0A075B6L2 103 aa18.46■□□□□ 0.55
SNTB1-202ENST00000517992 TSPAN13O95857 204 aa18.46■□□□□ 0.55
SNTB1-202ENST00000517992 IGKV3-20P01619 116 aa18.46■□□□□ 0.55
SNTB1-202ENST00000517992 CD300EQ496F6 205 aaPredicted RBP18.46■□□□□ 0.55
SNTB1-202ENST00000517992 AMTNQ6UX39 209 aa18.46■□□□□ 0.55
SNTB1-202ENST00000517992 SCGB1D4Q6XE38 83 aa18.46■□□□□ 0.55
SNTB1-202ENST00000517992 ZNF702PQ9H963 129 aa18.46■□□□□ 0.55
SNTB1-202ENST00000517992 HOXD3P31249 432 aaPredicted RBP18.46■□□□□ 0.54
SNTB1-202ENST00000517992 TCTEX1D4Q5JR98 221 aa18.46■□□□□ 0.54
SNTB1-202ENST00000517992 TGFAP01135 160 aa18.45■□□□□ 0.54
SNTB1-202ENST00000517992 Q6YL49 198 aa18.45■□□□□ 0.54
SNTB1-202ENST00000517992 HOXA3O43365 443 aaPredicted RBP18.44■□□□□ 0.54
SNTB1-202ENST00000517992 HERV-K104P63124 156 aa18.44■□□□□ 0.54
SNTB1-202ENST00000517992 PLEKHB2Q96CS7 222 aa18.44■□□□□ 0.54
SNTB1-202ENST00000517992 SETXQ7Z333 2677 aaKnown RBP18.44■□□□□ 0.54
SNTB1-202ENST00000517992 OTOGQ6ZRI0 2925 aa18.43■□□□□ 0.54
SNTB1-202ENST00000517992 UBE2D1P51668 147 aa18.43■□□□□ 0.54
SNTB1-202ENST00000517992 NFE4Q86UQ8 179 aa18.43■□□□□ 0.54
SNTB1-202ENST00000517992 EDA2RQ9HAV5 297 aa18.43■□□□□ 0.54
SNTB1-202ENST00000517992 TEX15Q9BXT5 2789 aa18.42■□□□□ 0.54
SNTB1-202ENST00000517992 SPANXB1Q9NS25 103 aaPredicted RBP18.42■□□□□ 0.54
SNTB1-202ENST00000517992 A0A0J9YY99 117 aa18.4■□□□□ 0.54
SNTB1-202ENST00000517992 A8MTW9 85 aa18.4■□□□□ 0.54
SNTB1-202ENST00000517992 IGHV4-31P0DP07 118 aa18.4■□□□□ 0.54
SNTB1-202ENST00000517992 AZU1P20160 251 aa18.4■□□□□ 0.54
SNTB1-202ENST00000517992 SRSF9Q13242 221 aaKnown RBP eCLIP18.4■□□□□ 0.541e-6■■■■□ 25.4
SNTB1-202ENST00000517992 KLHL30-AS1Q8NEE0 82 aa18.4■□□□□ 0.54
SNTB1-202ENST00000517992 ZNRF2Q8NHG8 242 aa18.4■□□□□ 0.54
SNTB1-202ENST00000517992 TEX48A0A1B0GUV7 120 aa18.39■□□□□ 0.54
SNTB1-202ENST00000517992 EMP1P54849 157 aa18.39■□□□□ 0.54
SNTB1-202ENST00000517992 RPL24P83731 157 aaKnown RBP18.39■□□□□ 0.54
SNTB1-202ENST00000517992 SIGMAR1Q99720 223 aa18.39■□□□□ 0.54
SNTB1-202ENST00000517992 I3L3M4 83 aa18.39■□□□□ 0.53
SNTB1-202ENST00000517992 C20orf203Q8NBC4 194 aa18.39■□□□□ 0.53
SNTB1-202ENST00000517992 ACANP16112 2415 aa18.38■□□□□ 0.53
SNTB1-202ENST00000517992 TRAV2A0A0B4J234 112 aa18.38■□□□□ 0.53
SNTB1-202ENST00000517992 TMEM170BQ5T4T1 132 aa18.38■□□□□ 0.53
SNTB1-202ENST00000517992 CSPG4Q6UVK1 2322 aa18.38■□□□□ 0.53
SNTB1-202ENST00000517992 H3BMG7 143 aa18.37■□□□□ 0.53
SNTB1-202ENST00000517992 P0DMU3 169 aa18.37■□□□□ 0.53
SNTB1-202ENST00000517992 FAM231AP0DMU4 169 aa18.37■□□□□ 0.53
SNTB1-202ENST00000517992 FAM231CP0DMU5 169 aa18.37■□□□□ 0.53
SNTB1-202ENST00000517992 DEFB104AQ8WTQ1 72 aa18.37■□□□□ 0.53
SNTB1-202ENST00000517992 DUX5Q96PT3 197 aa18.37■□□□□ 0.53
SNTB1-202ENST00000517992 CITED2Q99967 270 aaPredicted RBP18.37■□□□□ 0.53
SNTB1-202ENST00000517992 TSPEAR-AS2P59090 65 aa18.36■□□□□ 0.53
SNTB1-202ENST00000517992 MRPL16Q9NX20 251 aaKnown RBP18.35■□□□□ 0.53
SNTB1-202ENST00000517992 PRO0461Q9UI25 63 aa18.35■□□□□ 0.53
SNTB1-202ENST00000517992 WFDC2Q14508 124 aa18.35■□□□□ 0.53
SNTB1-202ENST00000517992 GAGE13Q4V321 117 aa18.35■□□□□ 0.53
SNTB1-202ENST00000517992 SLC25A29Q8N8R3 303 aa18.35■□□□□ 0.53
SNTB1-202ENST00000517992 AMELXQ99217 191 aa18.35■□□□□ 0.53
SNTB1-202ENST00000517992 Q8N2B8 174 aa18.34■□□□□ 0.53
SNTB1-202ENST00000517992 TLN2Q9Y4G6 2542 aa18.34■□□□□ 0.53
SNTB1-202ENST00000517992 J3QQQ9 107 aa18.34■□□□□ 0.53
SNTB1-202ENST00000517992 PIK3CD-AS1Q5SR53 167 aa18.34■□□□□ 0.53
SNTB1-202ENST00000517992 RBMY1A1P0DJD3 496 aaKnown RBP18.33■□□□□ 0.53
SNTB1-202ENST00000517992 RBMY1CP0DJD4 496 aa18.33■□□□□ 0.53
SNTB1-202ENST00000517992 RBMY1FQ15415 496 aaKnown RBP18.33■□□□□ 0.53
SNTB1-202ENST00000517992 SPAG8Q99932 426 aaPredicted RBP18.33■□□□□ 0.52
SNTB1-202ENST00000517992 TMEM223A0PJW6 202 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 CYSRT1A8MQ03 144 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 LEPROTO15243 131 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 LGALS3P17931 250 aaKnown RBP18.32■□□□□ 0.52
SNTB1-202ENST00000517992 J3QR89 54 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 IGHV3-30P01768 117 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 IGHV3-30-5P0DP03 117 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 CITED1Q99966 193 aa18.32■□□□□ 0.52
SNTB1-202ENST00000517992 KNCNA6PVL3 124 aa18.3■□□□□ 0.52
SNTB1-202ENST00000517992 LYRM7Q5U5X0 104 aa18.3■□□□□ 0.52
SNTB1-202ENST00000517992 PTH2Q96A98 100 aa18.3■□□□□ 0.52
SNTB1-202ENST00000517992 PYGO1Q9Y3Y4 419 aa18.3■□□□□ 0.52
SNTB1-202ENST00000517992 H3BMM0 161 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms