RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
VEGFA-216ENST00000512683 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
VEGFA-216ENST00000512683 GNG13Q9P2W3 67 aa8.22□□□□□ -1.09
VEGFA-216ENST00000512683 OR5AL1P0C617 328 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 UBE2D3P61077 147 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 UBE2D2P62837 147 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 PRR27Q6MZM9 219 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 DNAJC30Q96LL9 226 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 MANBALQ9NQG1 85 aa8.21□□□□□ -1.1
VEGFA-216ENST00000512683 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 SULT1A2P50226 295 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 RAB5CP51148 216 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 RAB4BP61018 213 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 TMEM97Q5BJF2 176 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 DGAT2L7PQ6IED9 249 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 TCTE3Q8IZS6 198 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 C1orf43Q9BWL3 253 aa8.2□□□□□ -1.1
VEGFA-216ENST00000512683 TRBV6-8A0A0A6YYG3 113 aa8.19□□□□□ -1.1
VEGFA-216ENST00000512683 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-216ENST00000512683 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
VEGFA-216ENST00000512683 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
VEGFA-216ENST00000512683 RAB19A4D1S5 217 aa8.18□□□□□ -1.1
VEGFA-216ENST00000512683 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
VEGFA-216ENST00000512683 CENPWQ5EE01 88 aa8.18□□□□□ -1.1
VEGFA-216ENST00000512683 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
VEGFA-216ENST00000512683 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 C19orf71A6NCJ1 209 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 CRPP02741 224 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 IGLC6P0CF74 106 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 GZMBP10144 247 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 SSTP61278 116 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 MEF2BQ02080 365 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-216ENST00000512683 ZNF56Q15929 161 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 MIAQ16674 131 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 SPANXN1Q5VSR9 72 aa8.17□□□□□ -1.1
VEGFA-216ENST00000512683 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
VEGFA-216ENST00000512683 TEX46H3BTG2 121 aa8.15□□□□□ -1.1
VEGFA-216ENST00000512683 PDE6DO43924 150 aa8.15□□□□□ -1.1
VEGFA-216ENST00000512683 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
VEGFA-216ENST00000512683 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
VEGFA-216ENST00000512683 CLRN3Q8NCR9 226 aa8.15□□□□□ -1.1
VEGFA-216ENST00000512683 SMIM12Q96EX1 92 aa8.15□□□□□ -1.1
VEGFA-216ENST00000512683 F5H697 171 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 BCL2P10415 239 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 GNG4P50150 75 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 C9orf163Q8N9P6 203 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 FER1L6-AS1Q8NA97 138 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 OR2D3Q8NGH3 330 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 AP1S3Q96PC3 154 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 PRR34Q9NV39 138 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 VAX2Q9UIW0 290 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
VEGFA-216ENST00000512683 ANGP03950 147 aaKnown RBP8.13□□□□□ -1.11
VEGFA-216ENST00000512683 RPS20P60866 119 aaKnown RBP8.13□□□□□ -1.11
VEGFA-216ENST00000512683 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
VEGFA-216ENST00000512683 MPV17L2Q567V2 206 aa8.13□□□□□ -1.11
VEGFA-216ENST00000512683 C15orf54Q8N8G6 183 aa8.13□□□□□ -1.11
VEGFA-216ENST00000512683 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
VEGFA-216ENST00000512683 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
VEGFA-216ENST00000512683 MED9Q9NWA0 146 aa8.13□□□□□ -1.11
VEGFA-216ENST00000512683 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
VEGFA-216ENST00000512683 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 M0QY20 66 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 IFNA1P01562 189 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 TPPP3Q9BW30 176 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
VEGFA-216ENST00000512683 P01737 135 aa8.11□□□□□ -1.11
VEGFA-216ENST00000512683 CACNG7P62955 275 aa8.11□□□□□ -1.11
VEGFA-216ENST00000512683 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
VEGFA-216ENST00000512683 TRAV8-4A0A0B4J246 113 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 F2Z2F3 143 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 K7EN84 100 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 PRSS1P07477 247 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 SUMO4Q6EEV6 95 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 SDIM1Q6ZPB5 146 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 Q6ZRU5 148 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 NUDT11Q96G61 164 aa8.1□□□□□ -1.11
VEGFA-216ENST00000512683 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 XKRY2A2RUG3 117 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 MGPP08493 103 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 NTF3P20783 257 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 S100A1P23297 94 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 TAGLN2P37802 199 aaKnown RBP8.09□□□□□ -1.11
VEGFA-216ENST00000512683 CTRLP40313 264 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
VEGFA-216ENST00000512683 RBX1P62877 108 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 KRTAP26-1Q6PEX3 210 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 OCC1Q8TAD7 63 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 RNF185Q96GF1 192 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 BIN3Q9NQY0 253 aa8.09□□□□□ -1.11
VEGFA-216ENST00000512683 A0A1B0GUV1 79 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 H7C1H1 209 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms