RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CRIP1P50238 77 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 UBE2G1P62253 170 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 COA6Q5JTJ3 125 aaKnown RBP6.06□□□□□ -1.44
NUP54-211ENST00000512151 NHLRC2Q8NBF2 726 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 FMC1Q96HJ9 113 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 C12orf57Q99622 126 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 LINC00467Q9BRT7 94 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 MLST8Q9BVC4 326 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 V9GYV3 84 aa6.06□□□□□ -1.44
NUP54-211ENST00000512151 TRAV12-3A0A0B4J271 114 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 TRBV7-9A0A0J9YWB2 115 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 IFITM10A6NMD0 228 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 GPX1P07203 203 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 RNASE4P34096 147 aaKnown RBP6.05□□□□□ -1.44
NUP54-211ENST00000512151 WFDC2Q14508 124 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 COX19Q49B96 90 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 LINC01620Q4KN68 170 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 LELP1Q5T871 98 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 FAM231DQ6ZW35 169 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 ZC2HC1AQ96GY0 325 aa6.05□□□□□ -1.44
NUP54-211ENST00000512151 C7orf71A4D174 169 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 FBLL1A6NHQ2 334 aaKnown RBP6.04□□□□□ -1.44
NUP54-211ENST00000512151 RS1O15537 224 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 SAPCD1Q5SSQ6 148 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 Q6AWC8 147 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 BAGE2Q86Y30 109 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 WFDC10BQ8IUB3 73 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 TMEM183AQ8IXX5 376 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 HIST3H2BBQ8N257 126 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 C11orf21Q9P2W6 132 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 ZFP30Q9Y2G7 519 aa6.04□□□□□ -1.44
NUP54-211ENST00000512151 ZNF493Q6ZR52 646 aa6.03□□□□□ -1.44
NUP54-211ENST00000512151 TMEM263Q8WUH6 116 aaKnown RBP6.03□□□□□ -1.44
NUP54-211ENST00000512151 TRAV9-2A0A087WT02 112 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 S100A2P29034 98 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 MUC21Q5SSG8 566 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 IBA57Q5T440 356 aaKnown RBP6.02□□□□□ -1.45
NUP54-211ENST00000512151 Q6ZTI0 123 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 TMEM256Q8N2U0 113 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 CIRBP-AS1Q8TBR5 109 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 C20orf144Q9BQM9 153 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 CHAC1Q9BUX1 264 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 TP53TG3Q9ULZ0 132 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 TRAPPC1Q9Y5R8 145 aa6.02□□□□□ -1.45
NUP54-211ENST00000512151 TRAV21A0A0B4J279 112 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 IGKV3D-20A0A0C4DH25 116 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 FABP5P3A8MUU1 101 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 PSCAO43653 123 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 SH2D1AO60880 128 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 CRYGDP07320 174 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 MGST1P10620 155 aaKnown RBP6.01□□□□□ -1.45
NUP54-211ENST00000512151 S100A12P80511 92 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 ANXA2RQ3ZCQ2 193 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 DNLZQ5SXM8 178 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 RNASE7Q9H1E1 156 aaKnown RBP6.01□□□□□ -1.45
NUP54-211ENST00000512151 ICOSQ9Y6W8 199 aa6.01□□□□□ -1.45
NUP54-211ENST00000512151 IGHV1OR15-1A0A075B7D0 117 aa6□□□□□ -1.45
NUP54-211ENST00000512151 XKRY2A2RUG3 117 aa6□□□□□ -1.45
NUP54-211ENST00000512151 C19orf71A6NCJ1 209 aa6□□□□□ -1.45
NUP54-211ENST00000512151 GNRH2O43555 120 aa6□□□□□ -1.45
NUP54-211ENST00000512151 GATCO43716 136 aaKnown RBP6□□□□□ -1.45
NUP54-211ENST00000512151 MT-ND6P03923 174 aa6□□□□□ -1.45
NUP54-211ENST00000512151 RPL37AP61513 92 aaKnown RBP6□□□□□ -1.45
NUP54-211ENST00000512151 LCE4AQ5TA78 99 aa6□□□□□ -1.45
NUP54-211ENST00000512151 PRR27Q6MZM9 219 aa6□□□□□ -1.45
NUP54-211ENST00000512151 WDR73Q6P4I2 378 aa6□□□□□ -1.45
NUP54-211ENST00000512151 RASL11AQ6T310 242 aa6□□□□□ -1.45
NUP54-211ENST00000512151 HIST1H2BLQ99880 126 aa6□□□□□ -1.45
NUP54-211ENST00000512151 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
NUP54-211ENST00000512151 LPAP08519 4548 aa6□□□□□ -1.45
NUP54-211ENST00000512151 EVI2AP22794 236 aa5.99□□□□□ -1.45
NUP54-211ENST00000512151 CT83Q5H943 113 aa5.99□□□□□ -1.45
NUP54-211ENST00000512151 NUDT10Q8NFP7 164 aa5.99□□□□□ -1.45
NUP54-211ENST00000512151 OR10D4PQ8NGN7 298 aa5.99□□□□□ -1.45
NUP54-211ENST00000512151 NUDT11Q96G61 164 aa5.99□□□□□ -1.45
NUP54-211ENST00000512151 NAGKQ9UJ70 344 aa5.99□□□□□ -1.45
NUP54-211ENST00000512151 TMSB15BA0A087X1C1 80 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 FABP4P15090 132 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 TDRG1Q3Y452 100 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 PDZD11Q5EBL8 140 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 PYY3Q5JQD4 70 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 FAM162BQ5T6X4 162 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 C11orf72Q8NBR9 251 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 TSKUQ8WUA8 353 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 PACRGQ96M98 296 aaPredicted RBP5.98□□□□□ -1.45
NUP54-211ENST00000512151 MRPL18Q9H0U6 180 aaKnown RBP5.98□□□□□ -1.45
NUP54-211ENST00000512151 NIT2Q9NQR4 276 aa5.98□□□□□ -1.45
NUP54-211ENST00000512151 MUC2Q02817 5179 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 IGHV3-16A0A0C4DH30 117 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 GRIFINA4D1Z8 144 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 FAM231BA6NCW3 169 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 PCP4L1A6NKN8 68 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 SNURFLB1AK76 121 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 K7EP13 123 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 LECT2O14960 151 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms