RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ADGRG4Q8IZF6 3080 aa11.26□□□□□ -0.61
USP38-202ENST00000510377 UBE2L6O14933 153 aa11.25□□□□□ -0.61
USP38-202ENST00000510377 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
USP38-202ENST00000510377 UBE2E2Q96LR5 201 aa11.25□□□□□ -0.61
USP38-202ENST00000510377 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
USP38-202ENST00000510377 Q8N1Y9 231 aa11.25□□□□□ -0.61
USP38-202ENST00000510377 Q8N6K4 173 aa11.25□□□□□ -0.61
USP38-202ENST00000510377 DAND5Q8N907 189 aa11.24□□□□□ -0.61
USP38-202ENST00000510377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
USP38-202ENST00000510377 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
USP38-202ENST00000510377 B5MCH6 92 aa11.24□□□□□ -0.61
USP38-202ENST00000510377 SCGB1A1P11684 91 aa11.24□□□□□ -0.61
USP38-202ENST00000510377 Q6ZS46 218 aa11.24□□□□□ -0.61
USP38-202ENST00000510377 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
USP38-202ENST00000510377 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
USP38-202ENST00000510377 EBI3Q14213 229 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 SS18L2Q9UHA2 77 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 B4DSR2 109 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 H3BMM0 161 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 UBE2WQ96B02 151 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 Q96MF0 132 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 A0A0J9YY99 117 aa11.23□□□□□ -0.61
USP38-202ENST00000510377 LMO4P61968 165 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 MSMBP08118 114 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 RNASE1P07998 156 aaKnown RBP11.22□□□□□ -0.61
USP38-202ENST00000510377 P0DMU3 169 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 FAM231AP0DMU4 169 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 FAM231CP0DMU5 169 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 CRYBA4P53673 196 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 HIST2H2BCQ6DN03 193 aa11.22□□□□□ -0.61
USP38-202ENST00000510377 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.61
USP38-202ENST00000510377 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
USP38-202ENST00000510377 DEFB136Q30KP8 78 aa11.21□□□□□ -0.61
USP38-202ENST00000510377 PIFOQ8TCI5 191 aa11.21□□□□□ -0.62
USP38-202ENST00000510377 XCL2Q9UBD3 114 aa11.21□□□□□ -0.62
USP38-202ENST00000510377 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
USP38-202ENST00000510377 Q6ZUT4 128 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 DNAL4O96015 105 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 CFAP47Q6ZTR5 3102 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 LEPROTO15243 131 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 EDN2P20800 178 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 FBXL19-AS1Q494R0 122 aa11.2□□□□□ -0.62
USP38-202ENST00000510377 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
USP38-202ENST00000510377 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 ZNF843Q8N446 348 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 CARD19Q96LW7 228 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 KALRNO60229 2985 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 DSCR9P59020 149 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 RNF183Q96D59 192 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
USP38-202ENST00000510377 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 CFAP126Q5VTH2 177 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 CLUHP3Q96NS8 147 aa11.18□□□□□ -0.62
USP38-202ENST00000510377 TACC2O95359 2948 aa11.17□□□□□ -0.62
USP38-202ENST00000510377 C11orf68Q9H3H3 251 aaKnown RBP11.17□□□□□ -0.62
USP38-202ENST00000510377 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
USP38-202ENST00000510377 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
USP38-202ENST00000510377 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
USP38-202ENST00000510377 RHOHQ15669 191 aa11.17□□□□□ -0.62
USP38-202ENST00000510377 RHODO00212 210 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 XGP55808 180 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 C11orf71Q6IPW1 123 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 SLC25A29Q8N8R3 303 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 A0A1W2PPR1 153 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 STHQ8IWL8 128 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 PRM2P04554 102 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
USP38-202ENST00000510377 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
USP38-202ENST00000510377 A8MZ25 164 aa11.15□□□□□ -0.62
USP38-202ENST00000510377 CFHR3Q02985 330 aa11.15□□□□□ -0.62
USP38-202ENST00000510377 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
USP38-202ENST00000510377 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
USP38-202ENST00000510377 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 IGHG2P01859 326 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 PROK1P58294 105 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 IFITM1P13164 125 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
USP38-202ENST00000510377 TSPEAR-AS2P59090 65 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 MED14OSP0DP75 135 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 LINC00158P58513 81 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 PSMG3-AS1Q96PY0 264 aa11.14□□□□□ -0.63
USP38-202ENST00000510377 GAGE12JA6NER3 117 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 GAGE4Q13068 117 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 GAGE5Q13069 117 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 TNRC18O15417 2968 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms