RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 FAM231DQ6ZW35 169 aa10.79□□□□□ -0.68
PDLIM5-212ENST00000509333 GTSF1Q8WW33 167 aa10.79□□□□□ -0.68
PDLIM5-212ENST00000509333 AP1S3Q96PC3 154 aa10.79□□□□□ -0.68
PDLIM5-212ENST00000509333 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
PDLIM5-212ENST00000509333 LRCOL1A6NCL2 159 aa10.78□□□□□ -0.68
PDLIM5-212ENST00000509333 EREGO14944 169 aa10.78□□□□□ -0.68
PDLIM5-212ENST00000509333 CTRLP40313 264 aa10.78□□□□□ -0.68
PDLIM5-212ENST00000509333 CEBPGP53567 150 aa10.78□□□□□ -0.68
PDLIM5-212ENST00000509333 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
PDLIM5-212ENST00000509333 APOBP04114 4563 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-212ENST00000509333 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.69
PDLIM5-212ENST00000509333 GATCO43716 136 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-212ENST00000509333 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM5-212ENST00000509333 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-212ENST00000509333 LAGE3Q14657 143 aa10.77□□□□□ -0.69
PDLIM5-212ENST00000509333 Q9HAA7 133 aa10.77□□□□□ -0.69
PDLIM5-212ENST00000509333 ZNF727A8MUV8 499 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 C9JQL5 133 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 SMIM7Q9BQ49 75 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 HSPG2P98160 4391 aa10.76□□□□□ -0.69
PDLIM5-212ENST00000509333 TRAV8-3A0A0A6YYJ7 113 aa10.75□□□□□ -0.69
PDLIM5-212ENST00000509333 A8MWL6 223 aa10.75□□□□□ -0.69
PDLIM5-212ENST00000509333 TWIST1Q15672 202 aa10.75□□□□□ -0.69
PDLIM5-212ENST00000509333 LINC01551Q86U37 167 aa10.75□□□□□ -0.69
PDLIM5-212ENST00000509333 KRTAP17-1Q9BYP8 105 aa10.75□□□□□ -0.69
PDLIM5-212ENST00000509333 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
PDLIM5-212ENST00000509333 MGPP08493 103 aa10.74□□□□□ -0.69
PDLIM5-212ENST00000509333 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
PDLIM5-212ENST00000509333 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
PDLIM5-212ENST00000509333 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
PDLIM5-212ENST00000509333 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 H7C1H1 209 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 PSCAO43653 123 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 SRSF3P84103 164 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 NIT2Q9NQR4 276 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 OSTCQ9NRP0 149 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
PDLIM5-212ENST00000509333 A0A087WX48 190 aa10.72□□□□□ -0.69
PDLIM5-212ENST00000509333 TMEM241Q24JQ0 296 aa10.72□□□□□ -0.69
PDLIM5-212ENST00000509333 CT83Q5H943 113 aa10.72□□□□□ -0.69
PDLIM5-212ENST00000509333 CDPF1Q6NVV7 123 aa10.72□□□□□ -0.69
PDLIM5-212ENST00000509333 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-212ENST00000509333 PGLYRP4Q96LB8 373 aa10.72□□□□□ -0.69
PDLIM5-212ENST00000509333 PEA15Q15121 130 aa10.71□□□□□ -0.69
PDLIM5-212ENST00000509333 ELOBQ15370 118 aa10.71□□□□□ -0.69
PDLIM5-212ENST00000509333 FAM74A3Q4VXF1 159 aa10.71□□□□□ -0.69
PDLIM5-212ENST00000509333 SMDT1Q9H4I9 107 aa10.71□□□□□ -0.69
PDLIM5-212ENST00000509333 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
PDLIM5-212ENST00000509333 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
PDLIM5-212ENST00000509333 TSKUQ8WUA8 353 aa10.7□□□□□ -0.7
PDLIM5-212ENST00000509333 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 RPL23P62829 140 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 IQCJQ1A5X6 159 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 KCNIP4Q6PIL6 250 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 ENHOQ6UWT2 76 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 FRZBQ92765 325 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
PDLIM5-212ENST00000509333 WFDC2Q14508 124 aa10.68□□□□□ -0.7
PDLIM5-212ENST00000509333 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
PDLIM5-212ENST00000509333 Q8N814 137 aa10.68□□□□□ -0.7
PDLIM5-212ENST00000509333 ISOC2Q96AB3 205 aa10.68□□□□□ -0.7
PDLIM5-212ENST00000509333 KRTAP4-5Q9BYR2 181 aa10.68□□□□□ -0.7
PDLIM5-212ENST00000509333 V9GYV3 84 aa10.68□□□□□ -0.7
PDLIM5-212ENST00000509333 DNAH8Q96JB1 4490 aa10.67□□□□□ -0.7
PDLIM5-212ENST00000509333 Q0VG73 95 aa10.67□□□□□ -0.7
PDLIM5-212ENST00000509333 GAGE6Q13070 117 aa10.67□□□□□ -0.7
PDLIM5-212ENST00000509333 Q8N976 141 aa10.67□□□□□ -0.7
PDLIM5-212ENST00000509333 BAALCQ8WXS3 180 aa10.67□□□□□ -0.7
PDLIM5-212ENST00000509333 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 TRAV26-2A0A0B4J265 109 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 A0A1B0GUT8 65 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 GCSHP23434 173 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 PKIAP61925 76 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 RBX1P62877 108 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 C15orf54Q8N8G6 183 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 RMI2Q96E14 147 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 NAT8Q9UHE5 227 aa10.66□□□□□ -0.7
PDLIM5-212ENST00000509333 IGKV2D-24A0A075B6R9 120 aa10.65□□□□□ -0.7
PDLIM5-212ENST00000509333 XGP55808 180 aa10.65□□□□□ -0.7
PDLIM5-212ENST00000509333 NUP35Q8NFH5 326 aa10.65□□□□□ -0.7
PDLIM5-212ENST00000509333 DEFB104AQ8WTQ1 72 aa10.65□□□□□ -0.7
PDLIM5-212ENST00000509333 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-212ENST00000509333 LCE2BO14633 110 aa10.64□□□□□ -0.71
PDLIM5-212ENST00000509333 RPL39LQ96EH5 51 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-212ENST00000509333 TMEM191AQ9H0A3 160 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms