RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SPAG17Q6Q759 2223 aa1.71□□□□□ -2.14
CHD1-205ENST00000508756 TRAV13-2A0A0B4J235 113 aa1.7□□□□□ -2.14
CHD1-205ENST00000508756 DAPK1P53355 1430 aa1.7□□□□□ -2.14
CHD1-205ENST00000508756 C12orf73Q69YU5 71 aa1.7□□□□□ -2.14
CHD1-205ENST00000508756 LINC00474Q9P2X8 69 aa1.7□□□□□ -2.14
CHD1-205ENST00000508756 COL6A6A6NMZ7 2263 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 ARFGEF1Q9Y6D6 1849 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.69□□□□□ -2.14
CHD1-205ENST00000508756 CLPSL1A2RUU4 121 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 LY6G6CO95867 125 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 SMIM6P0DI80 62 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 CCL3L1P16619 93 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 C4orf33Q8N1A6 199 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 COX7B2Q8TF08 81 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 CCDC180Q9P1Z9 1646 aa1.69□□□□□ -2.14
CHD1-205ENST00000508756 KIAA0100Q14667 2235 aaKnown RBP1.68□□□□□ -2.14
CHD1-205ENST00000508756 CASKIN1Q8WXD9 1431 aa1.68□□□□□ -2.14
CHD1-205ENST00000508756 TMEM218A2RU14 115 aa1.68□□□□□ -2.14
CHD1-205ENST00000508756 C8orf59Q8N0T1 100 aaPredicted RBP1.68□□□□□ -2.14
CHD1-205ENST00000508756 NRXN2Q9P2S2 1712 aa1.68□□□□□ -2.14
CHD1-205ENST00000508756 IFT140Q96RY7 1462 aa1.68□□□□□ -2.14
CHD1-205ENST00000508756 DOCK1Q14185 1865 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 FAM24AA6NFZ4 105 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 S100A10P60903 97 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 CCL8P80075 99 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 SSBP1Q04837 148 aaKnown RBP1.67□□□□□ -2.14
CHD1-205ENST00000508756 NCMAPQ5T1S8 102 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 C10orf128Q5T292 105 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 C5orf38Q86SI9 138 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 PLAC4Q8WY50 150 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 DPH3P1Q9H4G8 78 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 PHIPQ8WWQ0 1821 aa1.67□□□□□ -2.14
CHD1-205ENST00000508756 ZNF142P52746 1687 aaPredicted RBP1.67□□□□□ -2.14
CHD1-205ENST00000508756 CPSF1Q10570 1443 aaKnown RBP1.66□□□□□ -2.14
CHD1-205ENST00000508756 A0A087WTM6 91 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 SNCAP37840 140 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 LINC00575Q6W349 94 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 TTC9CQ8N5M4 171 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 Q8N6K4 173 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 SPANXDQ9BXN6 97 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 BET1LQ9NYM9 111 aa1.66□□□□□ -2.14
CHD1-205ENST00000508756 BLMP54132 1417 aaPredicted RBP1.66□□□□□ -2.14
CHD1-205ENST00000508756 PIGBOS1A0A0B4J2F0 54 aa1.65□□□□□ -2.15
CHD1-205ENST00000508756 SIX6O95475 246 aa1.65□□□□□ -2.15
CHD1-205ENST00000508756 KLKP1Q107X0 134 aa1.65□□□□□ -2.15
CHD1-205ENST00000508756 MYH8P13535 1937 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 PATJQ8NI35 1801 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 TRAV30A0A087WSZ9 112 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 RBAKDNA6NC62 111 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 EDDM3BP56851 147 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 ZNF818PQ6ZRF7 136 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 AQP10Q96PS8 301 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 TMEM14BQ9NUH8 114 aa1.64□□□□□ -2.15
CHD1-205ENST00000508756 PARP14Q460N5 1801 aa1.63□□□□□ -2.15
CHD1-205ENST00000508756 PLXNA1Q9UIW2 1896 aa1.63□□□□□ -2.15
CHD1-205ENST00000508756 ABCA1O95477 2261 aa1.63□□□□□ -2.15
CHD1-205ENST00000508756 V9GYV3 84 aa1.63□□□□□ -2.15
CHD1-205ENST00000508756 ROS1P08922 2347 aa1.63□□□□□ -2.15
CHD1-205ENST00000508756 MED13LQ71F56 2210 aa1.62□□□□□ -2.15
CHD1-205ENST00000508756 TRBV7-1A0A0A6YYK4 115 aa1.62□□□□□ -2.15
CHD1-205ENST00000508756 FAM74A4Q5TZK3 123 aa1.62□□□□□ -2.15
CHD1-205ENST00000508756 COMMD6Q7Z4G1 85 aa1.62□□□□□ -2.15
CHD1-205ENST00000508756 NRKQ7Z2Y5 1582 aa1.62□□□□□ -2.15
CHD1-205ENST00000508756 NWD2Q9ULI1 1742 aa1.62□□□□□ -2.15
CHD1-205ENST00000508756 CNTLNQ9NXG0 1405 aa1.61□□□□□ -2.15
CHD1-205ENST00000508756 UBE2L5PA0A1B0GUS4 154 aa1.61□□□□□ -2.15
CHD1-205ENST00000508756 MPC2O95563 127 aa1.61□□□□□ -2.15
CHD1-205ENST00000508756 UBE2L3P68036 154 aaKnown RBP1.61□□□□□ -2.15
CHD1-205ENST00000508756 Q96NJ1 140 aa1.6□□□□□ -2.15
CHD1-205ENST00000508756 ZDBF2Q9HCK1 2354 aa1.6□□□□□ -2.15
CHD1-205ENST00000508756 ZFYVE16Q7Z3T8 1539 aa1.6□□□□□ -2.15
CHD1-205ENST00000508756 CNTRLQ7Z7A1 2325 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 M0R143 59 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 SSSCA1O60232 199 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 PPP1R17O96001 155 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 SPINT3P49223 89 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 GNG11P61952 73 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 FAM213BQ8TBF2 198 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 PPP1R1CQ8WVI7 109 aa1.59□□□□□ -2.15
CHD1-205ENST00000508756 RB1CC1Q8TDY2 1594 aa1.59□□□□□ -2.16
CHD1-205ENST00000508756 CCNB3Q8WWL7 1395 aa1.59□□□□□ -2.16
CHD1-205ENST00000508756 CC2D2AQ9P2K1 1620 aa1.58□□□□□ -2.16
CHD1-205ENST00000508756 TRGV1A0A0A0MS02 117 aa1.58□□□□□ -2.16
CHD1-205ENST00000508756 DCDP81605 110 aaKnown RBP1.58□□□□□ -2.16
CHD1-205ENST00000508756 ACBD7Q8N6N7 88 aa1.58□□□□□ -2.16
CHD1-205ENST00000508756 PPIP5K1Q6PFW1 1433 aa1.57□□□□□ -2.16
CHD1-205ENST00000508756 C10orf71Q711Q0 1435 aa1.57□□□□□ -2.16
CHD1-205ENST00000508756 S100A8P05109 93 aa1.57□□□□□ -2.16
CHD1-205ENST00000508756 C10orf99Q6UWK7 81 aa1.57□□□□□ -2.16
CHD1-205ENST00000508756 DOCK11Q5JSL3 2073 aa1.57□□□□□ -2.16
CHD1-205ENST00000508756 SCAPERQ9BY12 1400 aa1.57□□□□□ -2.16
CHD1-205ENST00000508756 MYOZ3Q8TDC0 251 aa1.56□□□□□ -2.16
CHD1-205ENST00000508756 CYP4F30PQ9H0H9 118 aa1.56□□□□□ -2.16
CHD1-205ENST00000508756 LAMA4Q16363 1823 aa1.56□□□□□ -2.16
CHD1-205ENST00000508756 DOCK2Q92608 1830 aa1.56□□□□□ -2.16
CHD1-205ENST00000508756 MRC2Q9UBG0 1479 aa1.56□□□□□ -2.16
CHD1-205ENST00000508756 DCAF1Q9Y4B6 1507 aa1.56□□□□□ -2.16
CHD1-205ENST00000508756 SMARCA2P51531 1590 aa1.55□□□□□ -2.16
CHD1-205ENST00000508756 TNS1Q9HBL0 1735 aaKnown RBP1.55□□□□□ -2.16
CHD1-205ENST00000508756 PSME4Q14997 1843 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms