RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 UBE2G1P62253 170 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 ZNF876PQ49A33 203 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 Q6ZRU5 148 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 LINC01551Q86U37 167 aa6.09□□□□□ -1.43
NEDD9-211ENST00000508546 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-211ENST00000508546 IGKV2D-24A0A075B6R9 120 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 IGHV3-73A0A0B4J1V6 119 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 K7EQM0 130 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 S100A9P06702 114 aaKnown RBP6.08□□□□□ -1.44
NEDD9-211ENST00000508546 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 PTH2Q96A98 100 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 ISOC2Q96AB3 205 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 FMC1Q96HJ9 113 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 SMCO4Q9NRQ5 59 aa6.08□□□□□ -1.44
NEDD9-211ENST00000508546 TRAV34A0A0B4J273 112 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 SERTM2A0A1B0GWG4 89 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 MT-ND4LP03901 98 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 GOLT1AQ6ZVE7 132 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 Q86TA4 180 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 ARL6IP6Q8N6S5 226 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 TMEM75Q8N9X5 138 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 LINC00479Q96M42 142 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 C9orf85Q96MD7 179 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 CTDSP1Q9GZU7 261 aa6.07□□□□□ -1.44
NEDD9-211ENST00000508546 K7EN84 100 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 LTAP01374 205 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 ZFP2Q6ZN57 461 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 NIT1Q86X76 327 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 BAGE2Q86Y30 109 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 OCC1Q8TAD7 63 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 SMIM12Q96EX1 92 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 SFRP2Q96HF1 295 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 DNAJC30Q96LL9 226 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 TMEM242Q9NWH2 141 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 URGCP-MRPS24S4R325 110 aa6.06□□□□□ -1.44
NEDD9-211ENST00000508546 TRBV6-1A0A0K0K1D8 114 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 GAGE12JA6NER3 117 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 PPP1R2P9O14990 202 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 FLI1Q01543 452 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-211ENST00000508546 GAGE1Q13065 139 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 GAGE4Q13068 117 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 GAGE5Q13069 117 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 GAGE13Q4V321 117 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 PIK3CD-AS1Q5SR53 167 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 C15orf54Q8N8G6 183 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 SGK494Q96LW2 274 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 CHCHD7Q9BUK0 85 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
NEDD9-211ENST00000508546 GCGP01275 180 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 Q0VG73 95 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 ELOBQ15370 118 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 PRNTQ86SH4 94 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 OR10G8Q8NGN5 311 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 UBE2WQ96B02 151 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 C11orf21Q9P2W6 132 aa6.04□□□□□ -1.44
NEDD9-211ENST00000508546 A8MWV9 139 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 RNASE3P12724 160 aaKnown RBP6.03□□□□□ -1.44
NEDD9-211ENST00000508546 S100PP25815 95 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 PRR27Q6MZM9 219 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 KCNIP4Q6PIL6 250 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 YPEL4Q96NS1 127 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 BIN3Q9NQY0 253 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 Q9UF83 564 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 PSG8Q9UQ74 426 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 ZFP30Q9Y2G7 519 aa6.03□□□□□ -1.44
NEDD9-211ENST00000508546 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
NEDD9-211ENST00000508546 A0A087WX48 190 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 COLCA2A8K830 154 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 ZNF80P51504 273 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-211ENST00000508546 ODF1Q14990 250 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 FAM231DQ6ZW35 169 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 C1orf43Q9BWL3 253 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 SAMD10Q9BYL1 202 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 RNASE7Q9H1E1 156 aaKnown RBP6.02□□□□□ -1.45
NEDD9-211ENST00000508546 OSTCQ9NRP0 149 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-211ENST00000508546 V9GYV3 84 aa6.02□□□□□ -1.45
NEDD9-211ENST00000508546 LPAP08519 4548 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 TGIF2-C20orf24A0A0A6YYL0 155 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 SAPCD1Q5SSQ6 148 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 DMRTA1Q5VZB9 504 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 UFSP1Q6NVU6 142 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-211ENST00000508546 ZC2HC1AQ96GY0 325 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 IMMP2LQ96T52 175 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 IL36BQ9NZH7 164 aa6.01□□□□□ -1.45
NEDD9-211ENST00000508546 TRBV24-1A0A075B6N3 115 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 C19orf71A6NCJ1 209 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 USP17L23D6RBM5 183 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 PANO1I0J062 215 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 GATCO43716 136 aaKnown RBP6□□□□□ -1.45
NEDD9-211ENST00000508546 P01737 135 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 PRSS1P07477 247 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 CXCL1P09341 107 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 RAB5AP20339 215 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms