RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SPRNQ5BIV9 151 aa5.57□□□□□ -1.52
UBE2D3-224ENST00000508474 URB1-AS1Q96HZ7 61 aa5.57□□□□□ -1.52
UBE2D3-224ENST00000508474 ODF3Q96PU9 254 aa5.57□□□□□ -1.52
UBE2D3-224ENST00000508474 BLCAPP62952 87 aa5.57□□□□□ -1.52
UBE2D3-224ENST00000508474 LYRM9A8MSI8 78 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 H7C423 109 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 UBE2D3P61077 147 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 UBE2D2P62837 147 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 TRBV10-1A0A0K0K1A3 114 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 TIRAPP58753 221 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 C16orf74Q96GX8 76 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 ZMAT4Q9H898 229 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 FAM215AQ9Y5M1 114 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 HHLA3Q9XRX5 114 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 PYGO1Q9Y3Y4 419 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 NCKAP5O14513 1909 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 ARHGAP21Q5T5U3 1957 aa5.56□□□□□ -1.52
UBE2D3-224ENST00000508474 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 UBE2D1P51668 147 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 UBE2DNLQ8IWF7 75 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 Q8N9W7 124 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 NOP10Q9NPE3 64 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 CSDC2Q9Y534 153 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 J3QLI3 93 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 HRCT1Q6UXD1 115 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 Q8N7P7 452 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 NRGNQ92686 78 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 VPREB3Q9UKI3 123 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 BPY2O14599 106 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 NDUFB1O75438 58 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 NRACQ8N912 160 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 NUP210Q8TEM1 1887 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 ETDCA0A1B0GVM5 59 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 ZNF318Q5VUA4 2279 aa5.55□□□□□ -1.52
UBE2D3-224ENST00000508474 PIK3CD-AS1Q5SR53 167 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 AJUBAQ96IF1 538 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 CNFNQ9BYD5 112 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 IGHV4-4A0A075B6R2 117 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 WFDC11Q8NEX6 87 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 PRB1P04280 392 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 WNK2Q9Y3S1 2297 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 IBA57-AS1B1ANH7 110 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 NCR3O14931 201 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 GPHB5Q86YW7 130 aa5.54□□□□□ -1.52
UBE2D3-224ENST00000508474 COX7BP24311 80 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 CLPSL2Q6UWE3 100 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 CEP290O15078 2479 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 COL4A6Q14031 1691 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 KIF26AQ9ULI4 1882 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 TMEM89A2RUT3 159 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 APOC4P55056 127 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 IGHV4-28A0A0C4DH34 117 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 C5orf56Q8N8D9 126 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 DKK4Q9UBT3 224 aa5.53□□□□□ -1.52
UBE2D3-224ENST00000508474 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 A0A087WW49 117 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 PSCAO43653 123 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 NDUFS5O43920 106 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 CDKN2A-AS1Q9UH64 79 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 CAMK2N2Q96S95 79 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 UBE2BP63146 152 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 CDIP1Q9H305 208 aa5.52□□□□□ -1.53
UBE2D3-224ENST00000508474 ZNF407Q9C0G0 2248 aa5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 GNLYP22749 145 aa5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 CEMP1Q6PRD7 247 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 M0QY20 66 aa5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 IGFL2Q6UWQ7 119 aa5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 Q6ZS46 218 aa5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 COL4A4P53420 1690 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 EP400Q96L91 3159 aa5.51□□□□□ -1.53
UBE2D3-224ENST00000508474 TRBV7-7A0A0K0K1E9 115 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 GYPEP15421 78 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 C1orf229Q6ZS94 237 aaPredicted RBP5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 AKAP6Q13023 2319 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 Q6ZQT7 251 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 SPTA1P02549 2419 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 KIAA1549LQ6ZVL6 1849 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 J3QKU1 62 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 PRB2P02812 416 aaPredicted RBP5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 SHISA2Q6UWI4 295 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 ZFAND2AQ8N6M9 145 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 TMEM131Q92545 1883 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 POLR2KP53803 58 aaKnown RBP5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 USF3Q68DE3 2245 aa5.5□□□□□ -1.53
UBE2D3-224ENST00000508474 ADAMTS9Q9P2N4 1935 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 NACAE9PAV3 2078 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 CCDC140Q96MF4 163 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 LINC00467Q9BRT7 94 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 A0A096LPF7 62 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms