RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 PARP14Q460N5 1801 aa0.99□□□□□ -2.25
GYPA-204ENST00000504786 RBBP6Q7Z6E9 1792 aaKnown RBP0.98□□□□□ -2.25
GYPA-204ENST00000504786 TRAV13-2A0A0B4J235 113 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 CLPSL1A2RUU4 121 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 HCG22E2RYF7 251 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 CATR1Q13166 79 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 PPP3R2Q96LZ3 170 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 Q96NJ1 140 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 C10orf95Q9H7T3 257 aa0.98□□□□□ -2.25
GYPA-204ENST00000504786 KIAA0100Q14667 2235 aaKnown RBP0.98□□□□□ -2.25
GYPA-204ENST00000504786 PEG3Q9GZU2 1588 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 SIX6O95475 246 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 ACYP2P14621 99 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 SPATA8Q6RVD6 105 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 AQP10Q96PS8 301 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 FAM103A1Q9BTL3 118 aaKnown RBP0.97□□□□□ -2.25
GYPA-204ENST00000504786 BPESC1Q9GZL8 116 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 GNG8Q9UK08 70 aa0.97□□□□□ -2.25
GYPA-204ENST00000504786 ABCA1O95477 2261 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 TRGV1A0A0A0MS02 117 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 F6UZH7 168 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 IFNGP01579 166 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 SPINK7P58062 85 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 TMEM203Q969S6 136 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 TANC1Q9C0D5 1861 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 SMG6Q86US8 1419 aaKnown RBP0.96□□□□□ -2.26
GYPA-204ENST00000504786 CASKIN1Q8WXD9 1431 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 KDM6BO15054 1643 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 ARFGEF1Q9Y6D6 1849 aa0.96□□□□□ -2.26
GYPA-204ENST00000504786 NALCNQ8IZF0 1738 aa0.95□□□□□ -2.26
GYPA-204ENST00000504786 BCL9LQ86UU0 1499 aa0.95□□□□□ -2.26
GYPA-204ENST00000504786 MAP2P11137 1827 aaKnown RBP0.95□□□□□ -2.26
GYPA-204ENST00000504786 MRPL54Q6P161 138 aaKnown RBP0.95□□□□□ -2.26
GYPA-204ENST00000504786 SMIM11BQ8TCY0 68 aa0.95□□□□□ -2.26
GYPA-204ENST00000504786 PRR15LQ9BU68 103 aa0.95□□□□□ -2.26
GYPA-204ENST00000504786 KTN1Q86UP2 1357 aaKnown RBP0.95□□□□□ -2.26
GYPA-204ENST00000504786 GVQW2A0A096LPI5 108 aaPredicted RBP0.94□□□□□ -2.26
GYPA-204ENST00000504786 SMIM6P0DI80 62 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 TPPP2P59282 170 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 C10orf128Q5T292 105 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 SCP2D1Q9UJQ7 156 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 MED13LQ71F56 2210 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 FBN2P35556 2912 aa0.94□□□□□ -2.26
GYPA-204ENST00000504786 WDR7Q9Y4E6 1490 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 NWD2Q9ULI1 1742 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 NCOA3Q9Y6Q9 1424 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 CORTO00230 105 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 TNFP01375 233 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 S100A1P23297 94 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 C8orf59Q8N0T1 100 aaPredicted RBP0.93□□□□□ -2.26
GYPA-204ENST00000504786 TTC9CQ8N5M4 171 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
GYPA-204ENST00000504786 TNS1Q9HBL0 1735 aaKnown RBP0.92□□□□□ -2.26
GYPA-204ENST00000504786 MRPS10P82664 201 aaKnown RBP0.92□□□□□ -2.26
GYPA-204ENST00000504786 C9orf153Q5TBE3 101 aa0.92□□□□□ -2.26
GYPA-204ENST00000504786 VMO1Q7Z5L0 202 aa0.92□□□□□ -2.26
GYPA-204ENST00000504786 WFDC6Q9BQY6 131 aa0.92□□□□□ -2.26
GYPA-204ENST00000504786 CDK13Q14004 1512 aaKnown RBP0.92□□□□□ -2.26
GYPA-204ENST00000504786 ARAP2Q8WZ64 1704 aa0.92□□□□□ -2.26
GYPA-204ENST00000504786 A2ML1A8K2U0 1454 aa0.92□□□□□ -2.26
GYPA-204ENST00000504786 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
GYPA-204ENST00000504786 TMEM14DPA8MWL7 114 aa0.91□□□□□ -2.26
GYPA-204ENST00000504786 OOSP1A8MZH6 123 aa0.91□□□□□ -2.26
GYPA-204ENST00000504786 PPP1R17O96001 155 aa0.91□□□□□ -2.26
GYPA-204ENST00000504786 GNG4P50150 75 aa0.91□□□□□ -2.26
GYPA-204ENST00000504786 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
GYPA-204ENST00000504786 SCRIBQ14160 1630 aa0.9□□□□□ -2.26
GYPA-204ENST00000504786 TRAV1-2A0A0B4J238 106 aa0.9□□□□□ -2.27
GYPA-204ENST00000504786 PPP3R1P63098 170 aa0.9□□□□□ -2.27
GYPA-204ENST00000504786 Q6ZRX8 168 aa0.9□□□□□ -2.27
GYPA-204ENST00000504786 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
GYPA-204ENST00000504786 SPANXDQ9BXN6 97 aa0.9□□□□□ -2.27
GYPA-204ENST00000504786 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
GYPA-204ENST00000504786 EIF4G3O43432 1585 aaKnown RBP0.89□□□□□ -2.27
GYPA-204ENST00000504786 SMARCA2P51531 1590 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 GCHFRP30047 84 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 WHAMMP3Q1A5X7 153 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 C5orf38Q86SI9 138 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 BAGE3Q86Y29 109 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 CGREF1Q99674 301 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 IER3IP1Q9Y5U9 82 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 LRRC37A3O60309 1634 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 CPSF1Q10570 1443 aaKnown RBP0.89□□□□□ -2.27
GYPA-204ENST00000504786 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
GYPA-204ENST00000504786 MYOM2P54296 1465 aa0.88□□□□□ -2.27
GYPA-204ENST00000504786 R4GMQ9 66 aa0.88□□□□□ -2.27
GYPA-204ENST00000504786 F5P12259 2224 aa0.88□□□□□ -2.27
GYPA-204ENST00000504786 PATJQ8NI35 1801 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 SSSCA1O60232 199 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 COMMD6Q7Z4G1 85 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 SVBPQ8N300 66 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 CYP4F30PQ9H0H9 118 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 QRICH2Q9H0J4 1663 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 SSC5DA1L4H1 1573 aa0.87□□□□□ -2.27
GYPA-204ENST00000504786 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
GYPA-204ENST00000504786 CUL7Q14999 1698 aa0.86□□□□□ -2.27
GYPA-204ENST00000504786 FAM24AA6NFZ4 105 aa0.86□□□□□ -2.27
GYPA-204ENST00000504786 CCL18P55774 89 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms