RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
TCOF1-207ENST00000504761 ZNF479Q96JC4 524 aa10.59□□□□□ -0.71
TCOF1-207ENST00000504761 H3BMM0 161 aa10.59□□□□□ -0.71
TCOF1-207ENST00000504761 TMEM141Q96I45 108 aa10.59□□□□□ -0.71
TCOF1-207ENST00000504761 FLNAP21333 2647 aaKnown RBP10.59□□□□□ -0.71
TCOF1-207ENST00000504761 A0A1B0GWB2 263 aa10.59□□□□□ -0.71
TCOF1-207ENST00000504761 PRM2P04554 102 aa10.59□□□□□ -0.71
TCOF1-207ENST00000504761 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
TCOF1-207ENST00000504761 RASL10AQ92737 203 aa10.58□□□□□ -0.72
TCOF1-207ENST00000504761 LGALS9O00182 355 aa10.58□□□□□ -0.72
TCOF1-207ENST00000504761 TMEM238C9JI98 176 aa10.58□□□□□ -0.72
TCOF1-207ENST00000504761 DNAL4O96015 105 aa10.58□□□□□ -0.72
TCOF1-207ENST00000504761 MORN3Q6PF18 240 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-207ENST00000504761 PCP2Q8IVA1 136 aa10.58□□□□□ -0.72
TCOF1-207ENST00000504761 ITPR3Q14573 2671 aa10.57□□□□□ -0.72
TCOF1-207ENST00000504761 FRYQ5TBA9 3013 aa10.57□□□□□ -0.72
TCOF1-207ENST00000504761 GATD1Q8NB37 220 aa10.57□□□□□ -0.72
TCOF1-207ENST00000504761 TTTY13Q9BZ97 58 aa10.57□□□□□ -0.72
TCOF1-207ENST00000504761 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
TCOF1-207ENST00000504761 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
TCOF1-207ENST00000504761 P0DMU3 169 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 FAM231AP0DMU4 169 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 FAM231CP0DMU5 169 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 ZFP2Q6ZN57 461 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 UBE2DNLQ8IWF7 75 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 CBY1Q9Y3M2 126 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 USP24Q9UPU5 2620 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 RHOHQ15669 191 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 PRR9Q5T870 116 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 YPEL4Q96NS1 127 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 SS18Q15532 418 aa10.56□□□□□ -0.72
TCOF1-207ENST00000504761 ANGP03950 147 aaKnown RBP10.55□□□□□ -0.72
TCOF1-207ENST00000504761 COX8AP10176 69 aa10.55□□□□□ -0.72
TCOF1-207ENST00000504761 MYO15AQ9UKN7 3530 aa10.55□□□□□ -0.72
TCOF1-207ENST00000504761 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
TCOF1-207ENST00000504761 LINC00482Q8N8I6 264 aa10.55□□□□□ -0.72
TCOF1-207ENST00000504761 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
TCOF1-207ENST00000504761 DMXL2Q8TDJ6 3036 aa10.55□□□□□ -0.72
TCOF1-207ENST00000504761 GYPEP15421 78 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 SPINK8P0C7L1 97 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 PFN2P35080 140 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 C16orf74Q96GX8 76 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 MYMXA0A1B0GTQ4 84 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 HILS1P60008 231 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 ATRQ13535 2644 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 ERG28Q9UKR5 140 aa10.54□□□□□ -0.72
TCOF1-207ENST00000504761 Q6ZTI0 123 aa10.53□□□□□ -0.72
TCOF1-207ENST00000504761 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-207ENST00000504761 MRPS12O15235 138 aaKnown RBP10.52□□□□□ -0.72
TCOF1-207ENST00000504761 NDUFA12Q9UI09 145 aa10.52□□□□□ -0.72
TCOF1-207ENST00000504761 C21orf62-AS1Q17RA5 79 aa10.52□□□□□ -0.73
TCOF1-207ENST00000504761 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
TCOF1-207ENST00000504761 PGPEP1Q9NXJ5 209 aa10.52□□□□□ -0.73
TCOF1-207ENST00000504761 AGRNO00468 2067 aa10.52□□□□□ -0.73
TCOF1-207ENST00000504761 J3QQQ9 107 aa10.51□□□□□ -0.73
TCOF1-207ENST00000504761 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
TCOF1-207ENST00000504761 XCL1P47992 114 aa10.51□□□□□ -0.73
TCOF1-207ENST00000504761 CEMP1Q6PRD7 247 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-207ENST00000504761 Q6ZVH6 145 aa10.51□□□□□ -0.73
TCOF1-207ENST00000504761 K7EQD1 137 aa10.5□□□□□ -0.73
TCOF1-207ENST00000504761 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
TCOF1-207ENST00000504761 NXPH4O95158 308 aa10.5□□□□□ -0.73
TCOF1-207ENST00000504761 IGLV10-54A0A075B6I4 117 aa10.5□□□□□ -0.73
TCOF1-207ENST00000504761 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
TCOF1-207ENST00000504761 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
TCOF1-207ENST00000504761 SPART-AS1P0CW21 52 aa10.49□□□□□ -0.73
TCOF1-207ENST00000504761 GAS8-AS1O95177 125 aa10.49□□□□□ -0.73
TCOF1-207ENST00000504761 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
TCOF1-207ENST00000504761 NBEAQ8NFP9 2946 aa10.49□□□□□ -0.73
TCOF1-207ENST00000504761 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
TCOF1-207ENST00000504761 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
TCOF1-207ENST00000504761 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
TCOF1-207ENST00000504761 PROK1P58294 105 aa10.48□□□□□ -0.73
TCOF1-207ENST00000504761 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
TCOF1-207ENST00000504761 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
TCOF1-207ENST00000504761 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
TCOF1-207ENST00000504761 K7EMI3 77 aa10.48□□□□□ -0.73
TCOF1-207ENST00000504761 ATP5G1P05496 136 aa10.48□□□□□ -0.73
TCOF1-207ENST00000504761 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
TCOF1-207ENST00000504761 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
TCOF1-207ENST00000504761 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
TCOF1-207ENST00000504761 INSL3P51460 131 aa10.48□□□□□ -0.73
TCOF1-207ENST00000504761 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-207ENST00000504761 K7ERJ3 54 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 S100A7L2Q5SY68 101 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 MTURNQ8N3F0 131 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 ATMQ13315 3056 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 A0A1B0GV72 72 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 DLEU1O43261 78 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 PSCAO43653 123 aa10.47□□□□□ -0.73
TCOF1-207ENST00000504761 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-207ENST00000504761 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.73
TCOF1-207ENST00000504761 BVES-AS1Q5T3Y7 98 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms