RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 TMEM218A2RU14 115 aa13.51□□□□□ -0.25
HLA-B-255ENST00000498007 F8W036 122 aa13.51□□□□□ -0.25
HLA-B-255ENST00000498007 M0QY20 66 aa13.51□□□□□ -0.25
HLA-B-255ENST00000498007 ADCYAP1P18509 176 aa13.51□□□□□ -0.25
HLA-B-255ENST00000498007 IGHV3-38A0A0C4DH36 116 aa13.5□□□□□ -0.25
HLA-B-255ENST00000498007 C1orf134Q5TEV5 83 aa13.5□□□□□ -0.25
HLA-B-255ENST00000498007 TRAV26-2A0A0B4J265 109 aa13.49□□□□□ -0.25
HLA-B-255ENST00000498007 LINC00862A6NCI5 91 aa13.49□□□□□ -0.25
HLA-B-255ENST00000498007 RIGQ13278 110 aa13.49□□□□□ -0.25
HLA-B-255ENST00000498007 RASL11AQ6T310 242 aa13.49□□□□□ -0.25
HLA-B-255ENST00000498007 TNFRSF18Q9Y5U5 241 aa13.49□□□□□ -0.25
HLA-B-255ENST00000498007 EPPK1P58107 5090 aaKnown RBP13.49□□□□□ -0.25
HLA-B-255ENST00000498007 PPP1R2P9O14990 202 aa13.48□□□□□ -0.25
HLA-B-255ENST00000498007 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.48□□□□□ -0.25
HLA-B-255ENST00000498007 A0A087WWC5 75 aa13.47□□□□□ -0.25
HLA-B-255ENST00000498007 DNAH10OSP0CZ25 163 aa13.47□□□□□ -0.25
HLA-B-255ENST00000498007 C6orf223Q8N319 242 aa13.47□□□□□ -0.25
HLA-B-255ENST00000498007 DNAJC30Q96LL9 226 aa13.47□□□□□ -0.25
HLA-B-255ENST00000498007 DNAH17Q9UFH2 4485 aa13.46□□□□□ -0.25
HLA-B-255ENST00000498007 FAT2Q9NYQ8 4349 aa13.46□□□□□ -0.25
HLA-B-255ENST00000498007 RTL8CO15255 209 aa13.46□□□□□ -0.25
HLA-B-255ENST00000498007 MT-ND4LP03901 98 aa13.46□□□□□ -0.25
HLA-B-255ENST00000498007 GATD1Q8NB37 220 aa13.46□□□□□ -0.25
HLA-B-255ENST00000498007 TMEM191AQ9H0A3 160 aa13.46□□□□□ -0.25
HLA-B-255ENST00000498007 TRAV9-2A0A087WT02 112 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 IGHV3-30P01768 117 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 IGHV3-33P01772 117 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 IGHV3-30-3P0DP02 117 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 IGHV3-30-5P0DP03 117 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 ANAPC16Q96DE5 110 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 NIT2Q9NQR4 276 aa13.45□□□□□ -0.26
HLA-B-255ENST00000498007 CAMPP49913 170 aa13.44□□□□□ -0.26
HLA-B-255ENST00000498007 LINC01556Q5JQF7 62 aa13.44□□□□□ -0.26
HLA-B-255ENST00000498007 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
HLA-B-255ENST00000498007 DAZ4Q86SG3 579 aaKnown RBP13.44□□□□□ -0.26
HLA-B-255ENST00000498007 AMN1Q8IY45 258 aa13.44□□□□□ -0.26
HLA-B-255ENST00000498007 RPL39LQ96EH5 51 aaKnown RBP13.44□□□□□ -0.26
HLA-B-255ENST00000498007 SEC11CQ9BY50 192 aa13.44□□□□□ -0.26
HLA-B-255ENST00000498007 DAZ3Q9NR90 486 aaKnown RBP13.44□□□□□ -0.26
HLA-B-255ENST00000498007 Q8N3U1 123 aa13.43□□□□□ -0.26
HLA-B-255ENST00000498007 TRBV6-8A0A0A6YYG3 113 aa13.42□□□□□ -0.26
HLA-B-255ENST00000498007 LINC00336Q6ZUF6 198 aa13.42□□□□□ -0.26
HLA-B-255ENST00000498007 PRSS29PA6NIE9 313 aa13.41□□□□□ -0.26
HLA-B-255ENST00000498007 C10orf126Q8N4M7 172 aa13.41□□□□□ -0.26
HLA-B-255ENST00000498007 RNF185Q96GF1 192 aa13.41□□□□□ -0.26
HLA-B-255ENST00000498007 A0A1B0GW15 77 aa13.4□□□□□ -0.26
HLA-B-255ENST00000498007 RAB4AP20338 218 aa13.4□□□□□ -0.26
HLA-B-255ENST00000498007 HBBP68871 147 aa13.4□□□□□ -0.26
HLA-B-255ENST00000498007 DEFB104AQ8WTQ1 72 aa13.4□□□□□ -0.26
HLA-B-255ENST00000498007 FRZBQ92765 325 aa13.4□□□□□ -0.26
HLA-B-255ENST00000498007 URGCP-MRPS24S4R325 110 aa13.4□□□□□ -0.26
HLA-B-255ENST00000498007 K7EP13 123 aa13.39□□□□□ -0.27
HLA-B-255ENST00000498007 GAS8-AS1O95177 125 aa13.39□□□□□ -0.27
HLA-B-255ENST00000498007 NCR2O95944 276 aa13.39□□□□□ -0.27
HLA-B-255ENST00000498007 TMEM97Q5BJF2 176 aa13.39□□□□□ -0.27
HLA-B-255ENST00000498007 NTM-AS1Q6ZSK4 140 aa13.39□□□□□ -0.27
HLA-B-255ENST00000498007 HECTD4Q9Y4D8 3996 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 A0A1B0GXF2 115 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 SMKR1H3BMG3 65 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 S100A8P05109 93 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 KCNIP4Q6PIL6 250 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 NIT1Q86X76 327 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 MRAP2Q96G30 205 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 CHCHD5Q9BSY4 110 aa13.38□□□□□ -0.27
HLA-B-255ENST00000498007 TRBV25-1A0A075B6N4 114 aa13.37□□□□□ -0.27
HLA-B-255ENST00000498007 TMEM262E9PQX1 116 aa13.37□□□□□ -0.27
HLA-B-255ENST00000498007 BTF3P20290 206 aaKnown RBP13.37□□□□□ -0.27
HLA-B-255ENST00000498007 ATP5L2Q7Z4Y8 100 aa13.37□□□□□ -0.27
HLA-B-255ENST00000498007 A0A087WX48 190 aa13.36□□□□□ -0.27
HLA-B-255ENST00000498007 IGHV1-24A0A0C4DH33 117 aa13.36□□□□□ -0.27
HLA-B-255ENST00000498007 RPS10P46783 165 aaKnown RBP13.36□□□□□ -0.27
HLA-B-255ENST00000498007 C10orf91Q5T1B1 145 aa13.36□□□□□ -0.27
HLA-B-255ENST00000498007 FAM104BQ5XKR9 115 aa13.36□□□□□ -0.27
HLA-B-255ENST00000498007 Q9HAA7 133 aa13.36□□□□□ -0.27
HLA-B-255ENST00000498007 CARHSP1Q9Y2V2 147 aaKnown RBP13.36□□□□□ -0.27
HLA-B-255ENST00000498007 SDHAF1A6NFY7 115 aa13.35□□□□□ -0.27
HLA-B-255ENST00000498007 TNP2Q05952 138 aa13.35□□□□□ -0.27
HLA-B-255ENST00000498007 COTL1Q14019 142 aa13.35□□□□□ -0.27
HLA-B-255ENST00000498007 MRPL51Q4U2R6 128 aaKnown RBP13.35□□□□□ -0.27
HLA-B-255ENST00000498007 CTDSP1Q9GZU7 261 aa13.35□□□□□ -0.27
HLA-B-255ENST00000498007 IBA57-AS1B1ANH7 110 aa13.34□□□□□ -0.27
HLA-B-255ENST00000498007 GAGE6Q13070 117 aa13.34□□□□□ -0.27
HLA-B-255ENST00000498007 IQCJQ1A5X6 159 aa13.34□□□□□ -0.27
HLA-B-255ENST00000498007 NFE4Q86UQ8 179 aa13.34□□□□□ -0.27
HLA-B-255ENST00000498007 ST20Q9HBF5 79 aa13.34□□□□□ -0.27
HLA-B-255ENST00000498007 TRBV6-5A0A0K0K1A5 114 aa13.33□□□□□ -0.28
HLA-B-255ENST00000498007 AMTP48728 403 aa13.33□□□□□ -0.28
HLA-B-255ENST00000498007 MPV17L2Q567V2 206 aa13.33□□□□□ -0.28
HLA-B-255ENST00000498007 Q6ZRN7 208 aaPredicted RBP13.33□□□□□ -0.28
HLA-B-255ENST00000498007 BTF3L4Q96K17 158 aa13.33□□□□□ -0.28
HLA-B-255ENST00000498007 PKD1P98161 4303 aa13.33□□□□□ -0.28
HLA-B-255ENST00000498007 CLRN3Q8NCR9 226 aa13.32□□□□□ -0.28
HLA-B-255ENST00000498007 IMMP2LQ96T52 175 aa13.32□□□□□ -0.28
HLA-B-255ENST00000498007 TMEM243Q9BU79 118 aa13.32□□□□□ -0.28
HLA-B-255ENST00000498007 CHCHD7Q9BUK0 85 aa13.32□□□□□ -0.28
HLA-B-255ENST00000498007 C7orf77A4D0Y5 90 aa13.31□□□□□ -0.28
HLA-B-255ENST00000498007 APOC3P02656 99 aa13.31□□□□□ -0.28
HLA-B-255ENST00000498007 CKS2P33552 79 aa13.31□□□□□ -0.28
HLA-B-255ENST00000498007 PKIAP61925 76 aa13.31□□□□□ -0.28
HLA-B-255ENST00000498007 LAGE3Q14657 143 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms