RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 C3orf56Q8N813 242 aa8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 UBE2E2Q96LR5 201 aa8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 TRPT1Q86TN4 253 aaKnown RBP8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 C20orf173Q96LM9 149 aa8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 ANKRD17O75179 2603 aaKnown RBP8.69□□□□□ -1.02
SNRNP200-208ENST00000497539 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 SPRY2O43597 315 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 IL17RELQ6ZVW7 336 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 A0A1W2PRX2 142 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 C3orf22Q8N5N4 141 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 RHPN1-AS1Q9BWJ2 59 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 ZMAT4Q9H898 229 aa8.68□□□□□ -1.02
SNRNP200-208ENST00000497539 PSMG4Q5JS54 123 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 CEND1Q8N111 149 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 C11orf21Q9P2W6 132 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 DPM2O94777 84 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 ZNF415Q09FC8 603 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 LINC00526Q96FQ7 95 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
SNRNP200-208ENST00000497539 UQCRQO14949 82 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 C12orf74Q32Q52 190 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 CELSR1Q9NYQ6 3014 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 IGKV3D-20A0A0C4DH25 116 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 KRTAP1-1Q07627 177 aa8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 NXT2Q9NPJ8 142 aaKnown RBP8.66□□□□□ -1.02
SNRNP200-208ENST00000497539 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.02
SNRNP200-208ENST00000497539 TAL2Q16559 108 aa8.65□□□□□ -1.02
SNRNP200-208ENST00000497539 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
SNRNP200-208ENST00000497539 ODF3Q96PU9 254 aa8.65□□□□□ -1.02
SNRNP200-208ENST00000497539 FASNP49327 2511 aaKnown RBP8.65□□□□□ -1.03
SNRNP200-208ENST00000497539 ATP5LO75964 103 aa8.65□□□□□ -1.03
SNRNP200-208ENST00000497539 PMVKQ15126 192 aa8.65□□□□□ -1.03
SNRNP200-208ENST00000497539 C10orf99Q6UWK7 81 aa8.65□□□□□ -1.03
SNRNP200-208ENST00000497539 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.03
SNRNP200-208ENST00000497539 HIST1H4GQ99525 98 aa8.65□□□□□ -1.03
SNRNP200-208ENST00000497539 SPTAN1Q13813 2472 aaKnown RBP8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 DEFB104AQ8WTQ1 72 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 UTP20O75691 2785 aaKnown RBP8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 LRRK2Q5S007 2527 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 Q8N8P6 123 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 CHCHD5Q9BSY4 110 aa8.64□□□□□ -1.03
SNRNP200-208ENST00000497539 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
SNRNP200-208ENST00000497539 JPT2Q9H910 190 aa8.63□□□□□ -1.03
SNRNP200-208ENST00000497539 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
SNRNP200-208ENST00000497539 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 A0A087WW49 117 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 LAGE3Q14657 143 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 LINC01546A6NGU7 62 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 PRR9Q5T870 116 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 NRACQ8N912 160 aa8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 USP9YO00507 2555 aaPredicted RBP8.62□□□□□ -1.03
SNRNP200-208ENST00000497539 TRAV21A0A0B4J279 112 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 VPS13CQ709C8 3753 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 TRBV7-7A0A0K0K1E9 115 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 KLLNB2CW77 178 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 K7EQG2 157 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 SPANXN1Q5VSR9 72 aa8.61□□□□□ -1.03
SNRNP200-208ENST00000497539 A8MWV9 139 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 DNAJC9-AS1A6NH13 148 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 H3BVH4 76 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 CRYGAP11844 174 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 TIRAPP58753 221 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 DEFB1P60022 68 aa8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
SNRNP200-208ENST00000497539 GCN1Q92616 2671 aaKnown RBP8.59□□□□□ -1.03
SNRNP200-208ENST00000497539 HIST2H2BCQ6DN03 193 aa8.59□□□□□ -1.03
SNRNP200-208ENST00000497539 Q6ZSV7 163 aa8.59□□□□□ -1.03
SNRNP200-208ENST00000497539 C16orf95Q9H693 158 aa8.59□□□□□ -1.03
SNRNP200-208ENST00000497539 CELSR2Q9HCU4 2923 aa8.59□□□□□ -1.03
SNRNP200-208ENST00000497539 LINC01619G3V211 115 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 HLA-DRB4P13762 266 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 MORN3Q6PF18 240 aaPredicted RBP8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 HLA-DRB4X5D2U9 266 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 A8MTW9 85 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms