RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 CBLN2Q8IUK8 224 aa12.74□□□□□ -0.37
TSSC4-210ENST00000496468 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
TSSC4-210ENST00000496468 FRZBQ92765 325 aa12.74□□□□□ -0.37
TSSC4-210ENST00000496468 SMCO4Q9NRQ5 59 aa12.74□□□□□ -0.37
TSSC4-210ENST00000496468 ALMS1Q8TCU4 4167 aa12.73□□□□□ -0.37
TSSC4-210ENST00000496468 ELOBQ15370 118 aa12.73□□□□□ -0.37
TSSC4-210ENST00000496468 NEGR1Q7Z3B1 354 aa12.73□□□□□ -0.37
TSSC4-210ENST00000496468 Q9UF83 564 aa12.73□□□□□ -0.37
TSSC4-210ENST00000496468 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
TSSC4-210ENST00000496468 TGIF2-C20orf24A0A0A6YYL0 155 aa12.72□□□□□ -0.37
TSSC4-210ENST00000496468 NCR2O95944 276 aa12.72□□□□□ -0.37
TSSC4-210ENST00000496468 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
TSSC4-210ENST00000496468 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
TSSC4-210ENST00000496468 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
TSSC4-210ENST00000496468 UBE2DNLQ8IWF7 75 aa12.71□□□□□ -0.37
TSSC4-210ENST00000496468 DNAJC30Q96LL9 226 aa12.71□□□□□ -0.37
TSSC4-210ENST00000496468 TNFRSF18Q9Y5U5 241 aa12.71□□□□□ -0.37
TSSC4-210ENST00000496468 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 HLA-DQA1P01909 254 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 S100A1P23297 94 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 UBE2D3P61077 147 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 UBE2D2P62837 147 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 COX19Q49B96 90 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 RPL39LQ96EH5 51 aaKnown RBP12.7□□□□□ -0.38
TSSC4-210ENST00000496468 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 LYSTQ99698 3801 aa12.7□□□□□ -0.38
TSSC4-210ENST00000496468 CKS2P33552 79 aa12.69□□□□□ -0.38
TSSC4-210ENST00000496468 CCL18P55774 89 aa12.69□□□□□ -0.38
TSSC4-210ENST00000496468 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.69□□□□□ -0.38
TSSC4-210ENST00000496468 TENM2Q9NT68 2774 aa12.69□□□□□ -0.38
TSSC4-210ENST00000496468 D6R8Y8 96 aa12.68□□□□□ -0.38
TSSC4-210ENST00000496468 MT-ND6P03923 174 aa12.68□□□□□ -0.38
TSSC4-210ENST00000496468 YPEL4Q96NS1 127 aa12.68□□□□□ -0.38
TSSC4-210ENST00000496468 GNB1LQ9BYB4 327 aa12.68□□□□□ -0.38
TSSC4-210ENST00000496468 GAS8-AS1O95177 125 aa12.67□□□□□ -0.38
TSSC4-210ENST00000496468 PPP1R17O96001 155 aa12.67□□□□□ -0.38
TSSC4-210ENST00000496468 PPBPP02775 128 aa12.67□□□□□ -0.38
TSSC4-210ENST00000496468 RPS10P46783 165 aaKnown RBP12.67□□□□□ -0.38
TSSC4-210ENST00000496468 ORMDL3Q8N138 153 aa12.67□□□□□ -0.38
TSSC4-210ENST00000496468 LINC00476Q8WZB0 136 aa12.67□□□□□ -0.38
TSSC4-210ENST00000496468 TIRAPP58753 221 aa12.66□□□□□ -0.38
TSSC4-210ENST00000496468 ESRGQ1W209 222 aa12.66□□□□□ -0.38
TSSC4-210ENST00000496468 LGALS9CQ6DKI2 356 aa12.66□□□□□ -0.38
TSSC4-210ENST00000496468 DAZ4Q86SG3 579 aaKnown RBP12.66□□□□□ -0.38
TSSC4-210ENST00000496468 GTSF1LQ9H1H1 148 aa12.66□□□□□ -0.38
TSSC4-210ENST00000496468 DAZ3Q9NR90 486 aaKnown RBP12.66□□□□□ -0.38
TSSC4-210ENST00000496468 LINC00588Q9Y4M8 146 aa12.66□□□□□ -0.38
TSSC4-210ENST00000496468 DNAH1Q9P2D7 4330 aa12.66□□□□□ -0.38
TSSC4-210ENST00000496468 IGHV3-38A0A0C4DH36 116 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 TRBV6-5A0A0K0K1A5 114 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 SCO1O75880 301 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 APCSP02743 223 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 NRACQ8N912 160 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 ST20Q9HBF5 79 aa12.65□□□□□ -0.38
TSSC4-210ENST00000496468 MRPS16Q9Y3D3 137 aaKnown RBP12.65□□□□□ -0.38
TSSC4-210ENST00000496468 SDHAF1A6NFY7 115 aa12.64□□□□□ -0.39
TSSC4-210ENST00000496468 LY6G6CO95867 125 aa12.64□□□□□ -0.39
TSSC4-210ENST00000496468 MRPL18Q9H0U6 180 aaKnown RBP12.64□□□□□ -0.39
TSSC4-210ENST00000496468 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
TSSC4-210ENST00000496468 PRELID3AQ96N28 172 aa12.63□□□□□ -0.39
TSSC4-210ENST00000496468 PHOX2AO14813 284 aa12.62□□□□□ -0.39
TSSC4-210ENST00000496468 TNFRSF6BO95407 300 aa12.62□□□□□ -0.39
TSSC4-210ENST00000496468 NPYP01303 97 aa12.62□□□□□ -0.39
TSSC4-210ENST00000496468 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
TSSC4-210ENST00000496468 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
TSSC4-210ENST00000496468 LELP1Q5T871 98 aa12.62□□□□□ -0.39
TSSC4-210ENST00000496468 LAMTOR2Q9Y2Q5 125 aa12.62□□□□□ -0.39
TSSC4-210ENST00000496468 FABP9Q0Z7S8 132 aa12.61□□□□□ -0.39
TSSC4-210ENST00000496468 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
TSSC4-210ENST00000496468 TMEM70Q9BUB7 260 aa12.61□□□□□ -0.39
TSSC4-210ENST00000496468 TRAPPC1Q9Y5R8 145 aa12.61□□□□□ -0.39
TSSC4-210ENST00000496468 COTL1Q14019 142 aa12.6□□□□□ -0.39
TSSC4-210ENST00000496468 KIAA1644Q3SXP7 199 aa12.6□□□□□ -0.39
TSSC4-210ENST00000496468 C20orf78Q9BR46 151 aa12.6□□□□□ -0.39
TSSC4-210ENST00000496468 TRAV8-6A0A0B4J262 113 aa12.59□□□□□ -0.39
TSSC4-210ENST00000496468 LCE6AA0A183 80 aa12.59□□□□□ -0.39
TSSC4-210ENST00000496468 SACSQ9NZJ4 4579 aa12.59□□□□□ -0.39
TSSC4-210ENST00000496468 TRBV25-1A0A075B6N4 114 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 TRBV27A0A0K0K1C4 114 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 I3L3M4 83 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 PMCHP20382 165 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.4
TSSC4-210ENST00000496468 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
TSSC4-210ENST00000496468 POLR2KP53803 58 aaKnown RBP12.57□□□□□ -0.4
TSSC4-210ENST00000496468 RPL32P62910 135 aaKnown RBP12.57□□□□□ -0.4
TSSC4-210ENST00000496468 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
TSSC4-210ENST00000496468 DEFB104AQ8WTQ1 72 aa12.57□□□□□ -0.4
TSSC4-210ENST00000496468 COLCA2A8K830 154 aa12.56□□□□□ -0.4
TSSC4-210ENST00000496468 VCYO14598 125 aa12.56□□□□□ -0.4
TSSC4-210ENST00000496468 AMTP48728 403 aa12.56□□□□□ -0.4
TSSC4-210ENST00000496468 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
TSSC4-210ENST00000496468 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
TSSC4-210ENST00000496468 DNAH6Q9C0G6 4158 aa12.55□□□□□ -0.4
TSSC4-210ENST00000496468 SIVA1O15304 175 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms