RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 DEFA5Q01523 94 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 CATR1Q13166 79 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 SPCS2Q15005 226 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 PEA15Q15121 130 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 SPATA45Q537H7 98 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 C12orf73Q69YU5 71 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 OR2T2Q6IF00 324 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 TMEM14EPQ6UXP3 125 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 FOXI2Q6ZQN5 318 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 IDO2Q6ZQW0 420 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 LINC00299Q6ZSB3 139 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 SLC25A26Q70HW3 274 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 ARL17AQ8IVW1 177 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 FDCSPQ8NFU4 85 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 OR4S1Q8NGB4 309 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 OR10AC1Q8NH08 325 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 OTOSQ8NHW6 89 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 Q8TAT8 98 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 PP6455Q8WZ26 134 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 ARL11Q969Q4 196 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 FXYD6Q9H0Q3 95 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 WFDC10AQ9H1F0 79 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 BANF2Q9H503 90 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 NPVFQ9HCQ7 196 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 DYNLRB1Q9NP97 96 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 FKBP11Q9NYL4 201 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 PSENENQ9NZ42 101 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 CACFD1Q9UGQ2 172 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 JPT1Q9UK76 154 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 HIGD1AQ9Y241 93 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 MPC1Q9Y5U8 109 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 R4GMQ9 66 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 MYH7BA7E2Y1 1941 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 OBSL1O75147 1896 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 CHD1O14646 1710 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 CDC42BPAQ5VT25 1732 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 UNC13AQ9UPW8 1703 aa0.5□□□□□ -2.33
VPS50-219ENST00000495039 IQGAP1P46940 1657 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 PREX1Q8TCU6 1659 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 LAMC1P11047 1609 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 USP32Q8NFA0 1604 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 DUOX1Q9NRD9 1551 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 CNTRLQ7Z7A1 2325 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 ABCC6O95255 1503 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 DSPPQ9NZW4 1301 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TRAV23DV6A0A075B6W5 121 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TRAV30A0A087WSZ9 112 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 IGHV1-24A0A0C4DH33 117 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 A0A1W2PPB8 328 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 A0A1W2PRS3 328 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TMEM30CPA0ZSE6 113 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 FAM24AA6NFZ4 105 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SNRPGP15A8MWD9 76 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 KIR3DP1A8MWS1 328 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 B4DSR2 109 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 M0R2Z0 102 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 ARPC5O15511 151 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 KLF7O75840 302 aaPredicted RBP0.49□□□□□ -2.33
VPS50-219ENST00000495039 NDUFB6O95139 128 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SIX6O95475 246 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SFT2D2O95562 160 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 IGHV3-33P01772 117 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 APOC3P02656 99 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 GYPAP02724 150 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 RBP4P02753 201 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 MT-ND4LP03901 98 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 IL5P05113 134 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TRAPPC2P0DI81 140 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TRAPPC2BP0DI82 140 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SLC25A4P12235 298 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 COX6B1P14854 86 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 RPS27P42677 84 aaKnown RBP0.49□□□□□ -2.33
VPS50-219ENST00000495039 AKR1D1P51857 326 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 CKS1BP61024 79 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 UBE2G1P62253 170 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 CCL8P80075 99 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 S100A12P80511 92 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SSBP1Q04837 148 aaKnown RBP0.49□□□□□ -2.33
VPS50-219ENST00000495039 MIR22HGQ0VDD5 57 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 INSL4Q14641 139 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 HMGN3Q15651 99 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 ASB16-AS1Q495Z4 193 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 Q56UQ5 140 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 XAF1Q6GPH4 301 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TMEM91Q6ZNR0 172 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 C6orf201Q7Z4U5 140 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 C10orf111Q8N326 155 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TCTEX1D1Q8N7M0 179 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 VSTM2AQ8TAG5 236 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 ZC2HC1AQ96GY0 325 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 ARHGAP5-AS1Q96IT6 56 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 PFDN5Q99471 154 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 WFDC6Q9BQY6 131 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 VPS25Q9BRG1 176 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SMIM3Q9BZL3 60 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 LINC00470Q9BZP3 86 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 NMES1Q9C002 83 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 TAF9BQ9HBM6 251 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 NIT2Q9NQR4 276 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 LSM2Q9Y333 95 aaKnown RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms