RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
VARS-228ENST00000495010 AQP10Q96PS8 301 aa9.08□□□□□ -0.96
VARS-228ENST00000495010 IGLV10-54A0A075B6I4 117 aa9.07□□□□□ -0.96
VARS-228ENST00000495010 A0A087WYN8 130 aa9.07□□□□□ -0.96
VARS-228ENST00000495010 REG3AQ06141 175 aa9.07□□□□□ -0.96
VARS-228ENST00000495010 CIRBPQ14011 172 aaKnown RBP9.07□□□□□ -0.96
VARS-228ENST00000495010 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
VARS-228ENST00000495010 KRTAP26-1Q6PEX3 210 aa9.07□□□□□ -0.96
VARS-228ENST00000495010 BORCS7-ASMTA0A0B4J1R7 106 aa9.06□□□□□ -0.96
VARS-228ENST00000495010 TRBV6-1A0A0K0K1D8 114 aa9.06□□□□□ -0.96
VARS-228ENST00000495010 SMIM17P0DL12 118 aa9.06□□□□□ -0.96
VARS-228ENST00000495010 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
VARS-228ENST00000495010 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
VARS-228ENST00000495010 OR10AG1Q8NH19 301 aa9.06□□□□□ -0.96
VARS-228ENST00000495010 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 LTAP01374 205 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 P01737 135 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 AKR1C3P42330 323 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 SSTP61278 116 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 CST9LP1Q5W188 147 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 INO80EQ8NBZ0 244 aaPredicted RBP9.05□□□□□ -0.96
VARS-228ENST00000495010 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
VARS-228ENST00000495010 PHOX2AO14813 284 aa9.04□□□□□ -0.96
VARS-228ENST00000495010 CHTF8P0CG12 524 aa9.04□□□□□ -0.96
VARS-228ENST00000495010 RPL7L1Q6DKI1 246 aaKnown RBP9.04□□□□□ -0.96
VARS-228ENST00000495010 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
VARS-228ENST00000495010 TCEAL7Q9BRU2 100 aa9.04□□□□□ -0.96
VARS-228ENST00000495010 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
VARS-228ENST00000495010 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
VARS-228ENST00000495010 GZMBP10144 247 aa9.03□□□□□ -0.96
VARS-228ENST00000495010 RAB5CP51148 216 aa9.03□□□□□ -0.96
VARS-228ENST00000495010 GTSF1Q8WW33 167 aa9.03□□□□□ -0.96
VARS-228ENST00000495010 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 CXCL1P09341 107 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 IQCJQ1A5X6 159 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 LINC01600Q96MT4 127 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 ALG5Q9Y673 324 aa9.02□□□□□ -0.97
VARS-228ENST00000495010 SNAI2O43623 268 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 S100A9P06702 114 aaKnown RBP9.01□□□□□ -0.97
VARS-228ENST00000495010 OR5AL1P0C617 328 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 FHITP49789 147 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 WDR73Q6P4I2 378 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 MED28Q9H204 178 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 BATF3Q9NR55 127 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 KIF25-AS1Q9Y6Z4 181 aa9.01□□□□□ -0.97
VARS-228ENST00000495010 H7C1H1 209 aa9□□□□□ -0.97
VARS-228ENST00000495010 MGPP08493 103 aa9□□□□□ -0.97
VARS-228ENST00000495010 MAJINQ3KP22 176 aa9□□□□□ -0.97
VARS-228ENST00000495010 CFAP161Q6P656 301 aa9□□□□□ -0.97
VARS-228ENST00000495010 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
VARS-228ENST00000495010 TMEM243Q9BU79 118 aa9□□□□□ -0.97
VARS-228ENST00000495010 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
VARS-228ENST00000495010 UBE2L6O14933 153 aa8.99□□□□□ -0.97
VARS-228ENST00000495010 SLPIP03973 132 aa8.99□□□□□ -0.97
VARS-228ENST00000495010 SULT1A2P50226 295 aa8.99□□□□□ -0.97
VARS-228ENST00000495010 COX6A2Q02221 97 aa8.99□□□□□ -0.97
VARS-228ENST00000495010 FXYD6-FXYD2A0A087WZ82 144 aa8.98□□□□□ -0.97
VARS-228ENST00000495010 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
VARS-228ENST00000495010 A0A1B0GUV1 79 aa8.98□□□□□ -0.97
VARS-228ENST00000495010 NDUFS6O75380 124 aaKnown RBP8.98□□□□□ -0.97
VARS-228ENST00000495010 RPS10P46783 165 aaKnown RBP8.98□□□□□ -0.97
VARS-228ENST00000495010 BAGE2Q86Y30 109 aa8.98□□□□□ -0.97
VARS-228ENST00000495010 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
VARS-228ENST00000495010 PAGE4O60829 102 aa8.97□□□□□ -0.97
VARS-228ENST00000495010 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
VARS-228ENST00000495010 Q5BKY6 102 aa8.97□□□□□ -0.97
VARS-228ENST00000495010 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
VARS-228ENST00000495010 LYPD6BQ8NI32 183 aa8.97□□□□□ -0.97
VARS-228ENST00000495010 LRP2P98164 4655 aa8.96□□□□□ -0.97
VARS-228ENST00000495010 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 M0QY20 66 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 PFDN1O60925 122 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 NKX2-5P52952 324 aaPredicted RBP8.96□□□□□ -0.98
VARS-228ENST00000495010 ODF1Q14990 250 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 STPG4Q8N801 248 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 TPPP3Q9BW30 176 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 GFRA4Q9GZZ7 299 aa8.96□□□□□ -0.98
VARS-228ENST00000495010 IGKV3OR2-268A0A0C4DH90 116 aa8.95□□□□□ -0.98
VARS-228ENST00000495010 GAGE12HA6NDE8 117 aa8.95□□□□□ -0.98
VARS-228ENST00000495010 GIPP09681 153 aaPredicted RBP8.95□□□□□ -0.98
VARS-228ENST00000495010 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
VARS-228ENST00000495010 SUMO4Q6EEV6 95 aa8.95□□□□□ -0.98
VARS-228ENST00000495010 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 AMTP48728 403 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 RASL11AQ6T310 242 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 SPINK6Q6UWN8 80 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 MLST8Q9BVC4 326 aa8.94□□□□□ -0.98
VARS-228ENST00000495010 COTL1Q14019 142 aa8.93□□□□□ -0.98
VARS-228ENST00000495010 PGLYRP4Q96LB8 373 aa8.93□□□□□ -0.98
VARS-228ENST00000495010 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
VARS-228ENST00000495010 A0A1B0GV50 99 aa8.92□□□□□ -0.98
VARS-228ENST00000495010 CACNG7P62955 275 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1511.3 ms