RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 PLAC8L1A1L4L8 177 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 H3BVH4 76 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 RAB5AP20339 215 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 S100A4P26447 101 aaKnown RBP4.85□□□□□ -1.63
TPR-208ENST00000492973 RPS10P46783 165 aaKnown RBP4.85□□□□□ -1.63
TPR-208ENST00000492973 SSTP61278 116 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 CACNG7P62955 275 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 RIGQ13278 110 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 RRN3P1Q2M238 152 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 RASL11AQ6T310 242 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 TMEM136Q6ZRR5 245 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 Q75L30 129 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 ATP5L2Q7Z4Y8 100 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 GATD1Q8NB37 220 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 C11orf72Q8NBR9 251 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 OR10AG1Q8NH19 301 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 TPPP3Q9BW30 176 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 CNFNQ9BYD5 112 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 GSN-AS1Q9NRJ2 163 aa4.85□□□□□ -1.63
TPR-208ENST00000492973 A0A1B0GW15 77 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 CAMPP49913 170 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 EMP1P54849 157 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 COX19Q49B96 90 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 ZNF493Q6ZR52 646 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.84□□□□□ -1.63
TPR-208ENST00000492973 RNASE8Q8TDE3 154 aaKnown RBP4.84□□□□□ -1.63
TPR-208ENST00000492973 PTH2Q96A98 100 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 SPXQ9BT56 116 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 GNB1LQ9BYB4 327 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 CELA1Q9UNI1 258 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 PHLDA3Q9Y5J5 127 aa4.84□□□□□ -1.63
TPR-208ENST00000492973 TIMM8BQ9Y5J9 83 aaPredicted RBP4.84□□□□□ -1.63
TPR-208ENST00000492973 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 RYR2Q92736 4967 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 SNURFLB1AK76 121 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 PHOX2AO14813 284 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 NXPH4O95158 308 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 TRGC2P03986 189 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 RAB4BP61018 213 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 HBBP68871 147 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
TPR-208ENST00000492973 ZNF415Q09FC8 603 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 FABP9Q0Z7S8 132 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 GAGE5Q13069 117 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 GAGE6Q13070 117 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 BORCS7Q96B45 105 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 JPT2Q9H910 190 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 TRAPPC1Q9Y5R8 145 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 TENM2Q9NT68 2774 aa4.83□□□□□ -1.64
TPR-208ENST00000492973 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 M0R2P5 195 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 M0R381 172 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 S100A8P05109 93 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 RAB4AP20338 218 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 EVI2AP22794 236 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 LINC00315P59091 139 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 C12orf74Q32Q52 190 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 FAM222AQ5U5X8 452 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 FAM104BQ5XKR9 115 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 ZFP82Q8N141 532 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 C11orf45Q8TAV5 145 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 TMEM263Q8WUH6 116 aaKnown RBP4.82□□□□□ -1.64
TPR-208ENST00000492973 RASL10AQ92737 203 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 C16orf74Q96GX8 76 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 MUC4Q99102 2169 aa4.82□□□□□ -1.64
TPR-208ENST00000492973 RYR3Q15413 4870 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 HLA-DQA1P01909 254 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 APCSP02743 223 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 MT-ND6P03923 174 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 CRYGDP07320 174 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 DAZ2Q13117 558 aaKnown RBP4.81□□□□□ -1.64
TPR-208ENST00000492973 SLAQ13239 276 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 KIAA1644Q3SXP7 199 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 MRPL51Q4U2R6 128 aaKnown RBP4.81□□□□□ -1.64
TPR-208ENST00000492973 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 C14orf178Q8N769 122 aaPredicted RBP4.81□□□□□ -1.64
TPR-208ENST00000492973 POM121L12Q8N7R1 296 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 MUC7Q8TAX7 377 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 FRZBQ92765 325 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 RNF185Q96GF1 192 aa4.81□□□□□ -1.64
TPR-208ENST00000492973 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
TPR-208ENST00000492973 LYRM9A8MSI8 78 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 C1orf196B1AJZ1 125 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 RS1O15537 224 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 TRGC1P0CF51 173 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 LGALS9BQ3B8N2 356 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 ZFAND6Q6FIF0 208 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 UFSP1Q6NVU6 142 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 Q6ZTI0 123 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 SMIM15Q7Z3B0 74 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 AMN1Q8IY45 258 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 NDUFAF3Q9BU61 184 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 SAMD10Q9BYL1 202 aa4.8□□□□□ -1.64
TPR-208ENST00000492973 MRPL16Q9NX20 251 aaKnown RBP4.8□□□□□ -1.64
TPR-208ENST00000492973 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms