RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 DEFB104AQ8WTQ1 72 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 BAALCQ8WXS3 180 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 DAZAP1Q96EP5 407 aaKnown RBP5.77□□□□□ -1.49
NUP50-217ENST00000491860 DNAJC30Q96LL9 226 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 Q9UF83 564 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 TRBV25-1A0A075B6N4 114 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 TRAV1-1A0A0B4J248 108 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 LECT2O14960 151 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 CACNG7P62955 275 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 WFDC2Q14508 124 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 CHCHD5Q9BSY4 110 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 FAM30AQ9NZY2 134 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 VAX2Q9UIW0 290 aa5.76□□□□□ -1.49
NUP50-217ENST00000491860 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
NUP50-217ENST00000491860 F2Z2F3 143 aa5.75□□□□□ -1.49
NUP50-217ENST00000491860 J3QL48 77 aa5.75□□□□□ -1.49
NUP50-217ENST00000491860 PDE6DO43924 150 aa5.75□□□□□ -1.49
NUP50-217ENST00000491860 IFNA1P01562 189 aa5.75□□□□□ -1.49
NUP50-217ENST00000491860 ANGP03950 147 aaKnown RBP5.75□□□□□ -1.49
NUP50-217ENST00000491860 TAGLN2P37802 199 aaKnown RBP5.75□□□□□ -1.49
NUP50-217ENST00000491860 RPL35P42766 123 aaKnown RBP5.75□□□□□ -1.49
NUP50-217ENST00000491860 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
NUP50-217ENST00000491860 A0A1B0GV50 99 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 SMLR1H3BR10 107 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 TRGC1P0CF51 173 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 HAMPP81172 84 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 RPL19P84098 196 aaKnown RBP5.74□□□□□ -1.49
NUP50-217ENST00000491860 DGAT2L7PQ6IED9 249 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 C15orf54Q8N8G6 183 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 CLRN3Q8NCR9 226 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 DERL1Q9BUN8 251 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 CHAC1Q9BUX1 264 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 GNG13Q9P2W3 67 aa5.74□□□□□ -1.49
NUP50-217ENST00000491860 IGHV1-24A0A0C4DH33 117 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 IGLV2-8P01709 118 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 P01737 135 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 GNG4P50150 75 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 CCL20P78556 96 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 MEF2BQ02080 365 aaPredicted RBP5.73□□□□□ -1.49
NUP50-217ENST00000491860 IQCJQ1A5X6 159 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 CENPWQ5EE01 88 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 ENHOQ6UWT2 76 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 FER1L6-AS1Q8NA97 138 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 OR2D3Q8NGH3 330 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
NUP50-217ENST00000491860 TRAV8-4A0A0B4J246 113 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
NUP50-217ENST00000491860 IGLC6P0CF74 106 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 GZMBP10144 247 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 SULT1A2P50226 295 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 SCXQ7RTU7 201 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 PGLYRP4Q96LB8 373 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 KIF25-AS1Q9Y6Z4 181 aa5.72□□□□□ -1.49
NUP50-217ENST00000491860 A0A1B0GUV1 79 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 C19orf71A6NCJ1 209 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 USP17L23D6RBM5 183 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 HLA-DQA1P01909 254 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 MGPP08493 103 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 RBX1P62877 108 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 RASL11AQ6T310 242 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 SLC51BQ86UW2 128 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 TPPP3Q9BW30 176 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 MED9Q9NWA0 146 aa5.71□□□□□ -1.5
NUP50-217ENST00000491860 MUC21A0A0G2JKD1 596 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 MUC21A0A140T8X8 626 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 M0QY20 66 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 UBE2L6O14933 153 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 SUMO4Q6EEV6 95 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 NTM-AS1Q6ZSK4 140 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 SMIM15Q7Z3B0 74 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 C9orf163Q8N9P6 203 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 TMEM243Q9BU79 118 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 NIT2Q9NQR4 276 aa5.7□□□□□ -1.5
NUP50-217ENST00000491860 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.69□□□□□ -1.5
NUP50-217ENST00000491860 OXTP01178 125 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 BCL2P10415 239 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 SSTP61278 116 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 REG3AQ06141 175 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 GAGE6Q13070 117 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 COTL1Q14019 142 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 TEX261Q6UWH6 196 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 TCTE3Q8IZS6 198 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 LINC00269Q8N2A0 174 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 C9orf62Q8N4C0 152 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 FAM210AQ96ND0 272 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 AP5S1Q9NUS5 200 aa5.69□□□□□ -1.5
NUP50-217ENST00000491860 NTF3P20783 257 aa5.68□□□□□ -1.5
NUP50-217ENST00000491860 CTRLP40313 264 aa5.68□□□□□ -1.5
NUP50-217ENST00000491860 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
NUP50-217ENST00000491860 CNBPP62633 177 aaKnown RBP5.68□□□□□ -1.5
NUP50-217ENST00000491860 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
NUP50-217ENST00000491860 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
NUP50-217ENST00000491860 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms