RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 SEC11CQ9BY50 192 aa13.39□□□□□ -0.27
SEC22A-209ENST00000491366 DNAH6Q9C0G6 4158 aa13.39□□□□□ -0.27
SEC22A-209ENST00000491366 TRAV26-2A0A0B4J265 109 aa13.38□□□□□ -0.27
SEC22A-209ENST00000491366 LELP1Q5T871 98 aa13.38□□□□□ -0.27
SEC22A-209ENST00000491366 TRAV8-6A0A0B4J262 113 aa13.37□□□□□ -0.27
SEC22A-209ENST00000491366 IGHV3-38A0A0C4DH36 116 aa13.37□□□□□ -0.27
SEC22A-209ENST00000491366 RASL11AQ6T310 242 aa13.37□□□□□ -0.27
SEC22A-209ENST00000491366 ANAPC16Q96DE5 110 aa13.37□□□□□ -0.27
SEC22A-209ENST00000491366 TNFRSF18Q9Y5U5 241 aa13.37□□□□□ -0.27
SEC22A-209ENST00000491366 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
SEC22A-209ENST00000491366 KRTAP1-5Q9BYS1 174 aa13.36□□□□□ -0.27
SEC22A-209ENST00000491366 CAMPP49913 170 aa13.35□□□□□ -0.27
SEC22A-209ENST00000491366 MRPL54Q6P161 138 aaKnown RBP13.35□□□□□ -0.27
SEC22A-209ENST00000491366 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.35□□□□□ -0.27
SEC22A-209ENST00000491366 GATD1Q8NB37 220 aa13.35□□□□□ -0.27
SEC22A-209ENST00000491366 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
SEC22A-209ENST00000491366 TMEM191AQ9H0A3 160 aa13.35□□□□□ -0.27
SEC22A-209ENST00000491366 A0A087WWC5 75 aa13.34□□□□□ -0.27
SEC22A-209ENST00000491366 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
SEC22A-209ENST00000491366 NIT2Q9NQR4 276 aa13.33□□□□□ -0.28
SEC22A-209ENST00000491366 DNAH10OSP0CZ25 163 aa13.32□□□□□ -0.28
SEC22A-209ENST00000491366 C1orf134Q5TEV5 83 aa13.32□□□□□ -0.28
SEC22A-209ENST00000491366 RPL39LQ96EH5 51 aaKnown RBP13.32□□□□□ -0.28
SEC22A-209ENST00000491366 A0A1B0GW15 77 aa13.31□□□□□ -0.28
SEC22A-209ENST00000491366 RAB4AP20338 218 aa13.31□□□□□ -0.28
SEC22A-209ENST00000491366 C10orf91Q5T1B1 145 aa13.31□□□□□ -0.28
SEC22A-209ENST00000491366 DAZ4Q86SG3 579 aaKnown RBP13.31□□□□□ -0.28
SEC22A-209ENST00000491366 RNF185Q96GF1 192 aa13.31□□□□□ -0.28
SEC22A-209ENST00000491366 DAZ3Q9NR90 486 aaKnown RBP13.31□□□□□ -0.28
SEC22A-209ENST00000491366 TRAV9-2A0A087WT02 112 aa13.3□□□□□ -0.28
SEC22A-209ENST00000491366 IGHV3-30P01768 117 aa13.3□□□□□ -0.28
SEC22A-209ENST00000491366 IGHV3-33P01772 117 aa13.3□□□□□ -0.28
SEC22A-209ENST00000491366 IGHV3-30-3P0DP02 117 aa13.3□□□□□ -0.28
SEC22A-209ENST00000491366 IGHV3-30-5P0DP03 117 aa13.3□□□□□ -0.28
SEC22A-209ENST00000491366 HBBP68871 147 aa13.3□□□□□ -0.28
SEC22A-209ENST00000491366 CARHSP1Q9Y2V2 147 aaKnown RBP13.3□□□□□ -0.28
SEC22A-209ENST00000491366 GAS8-AS1O95177 125 aa13.29□□□□□ -0.28
SEC22A-209ENST00000491366 S100A8P05109 93 aa13.29□□□□□ -0.28
SEC22A-209ENST00000491366 LINC01556Q5JQF7 62 aa13.29□□□□□ -0.28
SEC22A-209ENST00000491366 C6orf223Q8N319 242 aa13.29□□□□□ -0.28
SEC22A-209ENST00000491366 Q8N3U1 123 aa13.29□□□□□ -0.28
SEC22A-209ENST00000491366 DEFB104AQ8WTQ1 72 aa13.29□□□□□ -0.28
SEC22A-209ENST00000491366 TRBV6-8A0A0A6YYG3 113 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 A0A1B0GXF2 115 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 RTL8CO15255 209 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 NCR2O95944 276 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 MRAP2Q96G30 205 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 CTDSP1Q9GZU7 261 aa13.28□□□□□ -0.28
SEC22A-209ENST00000491366 FAM104BQ5XKR9 115 aa13.27□□□□□ -0.29
SEC22A-209ENST00000491366 ATP5L2Q7Z4Y8 100 aa13.27□□□□□ -0.29
SEC22A-209ENST00000491366 FRZBQ92765 325 aa13.27□□□□□ -0.29
SEC22A-209ENST00000491366 C7orf77A4D0Y5 90 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 APOC3P02656 99 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 MRPL51Q4U2R6 128 aaKnown RBP13.26□□□□□ -0.29
SEC22A-209ENST00000491366 TMEM97Q5BJF2 176 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 NTM-AS1Q6ZSK4 140 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 CLRN3Q8NCR9 226 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 CHCHD5Q9BSY4 110 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 URGCP-MRPS24S4R325 110 aa13.26□□□□□ -0.29
SEC22A-209ENST00000491366 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
SEC22A-209ENST00000491366 KCNIP4Q6PIL6 250 aa13.25□□□□□ -0.29
SEC22A-209ENST00000491366 NIT1Q86X76 327 aa13.25□□□□□ -0.29
SEC22A-209ENST00000491366 C10orf126Q8N4M7 172 aa13.25□□□□□ -0.29
SEC22A-209ENST00000491366 BTF3L4Q96K17 158 aa13.25□□□□□ -0.29
SEC22A-209ENST00000491366 RPS10P5Q9NQ39 176 aa13.25□□□□□ -0.29
SEC22A-209ENST00000491366 SDHAF1A6NFY7 115 aa13.24□□□□□ -0.29
SEC22A-209ENST00000491366 TMEM262E9PQX1 116 aa13.24□□□□□ -0.29
SEC22A-209ENST00000491366 NDUFA5Q16718 116 aa13.24□□□□□ -0.29
SEC22A-209ENST00000491366 IMMP2LQ96T52 175 aa13.24□□□□□ -0.29
SEC22A-209ENST00000491366 ST20Q9HBF5 79 aa13.24□□□□□ -0.29
SEC22A-209ENST00000491366 TRBV25-1A0A075B6N4 114 aa13.23□□□□□ -0.29
SEC22A-209ENST00000491366 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
SEC22A-209ENST00000491366 K7EP13 123 aa13.23□□□□□ -0.29
SEC22A-209ENST00000491366 COTL1Q14019 142 aa13.23□□□□□ -0.29
SEC22A-209ENST00000491366 RHEBQ15382 184 aa13.23□□□□□ -0.29
SEC22A-209ENST00000491366 A0A087WX48 190 aa13.22□□□□□ -0.29
SEC22A-209ENST00000491366 TRBV6-5A0A0K0K1A5 114 aa13.22□□□□□ -0.29
SEC22A-209ENST00000491366 PRSS29PA6NIE9 313 aa13.22□□□□□ -0.29
SEC22A-209ENST00000491366 LINC00336Q6ZUF6 198 aa13.22□□□□□ -0.29
SEC22A-209ENST00000491366 SLC7A5P1Q8MH63 180 aa13.22□□□□□ -0.29
SEC22A-209ENST00000491366 S100PP25815 95 aa13.21□□□□□ -0.29
SEC22A-209ENST00000491366 CKS2P33552 79 aa13.21□□□□□ -0.29
SEC22A-209ENST00000491366 GAGE6Q13070 117 aa13.21□□□□□ -0.29
SEC22A-209ENST00000491366 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
SEC22A-209ENST00000491366 PMCHP20382 165 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 AMTP48728 403 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 SVBPQ8N300 66 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 NRACQ8N912 160 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 TMEM243Q9BU79 118 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 TMEM70Q9BUB7 260 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 Q9HAA7 133 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 TMEM242Q9NWH2 141 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 DNAH10Q8IVF4 4471 aa13.2□□□□□ -0.3
SEC22A-209ENST00000491366 IBA57-AS1B1ANH7 110 aa13.19□□□□□ -0.3
SEC22A-209ENST00000491366 D6R8Y8 96 aa13.19□□□□□ -0.3
SEC22A-209ENST00000491366 I3L3M4 83 aa13.19□□□□□ -0.3
SEC22A-209ENST00000491366 SNAPINO95295 136 aa13.19□□□□□ -0.3
SEC22A-209ENST00000491366 PPP1R17O96001 155 aa13.19□□□□□ -0.3
SEC22A-209ENST00000491366 BTF3P20290 206 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms