RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CHCHD7Q9BUK0 85 aa20.81■□□□□ 0.92
LDB1-204ENST00000490751 KCNIP4Q6PIL6 250 aa20.8■□□□□ 0.92
LDB1-204ENST00000490751 TRBV6-8A0A0A6YYG3 113 aa20.79■□□□□ 0.92
LDB1-204ENST00000490751 P01737 135 aa20.79■□□□□ 0.92
LDB1-204ENST00000490751 TAGLN2P37802 199 aaKnown RBP20.79■□□□□ 0.92
LDB1-204ENST00000490751 DNAJC30Q96LL9 226 aa20.79■□□□□ 0.92
LDB1-204ENST00000490751 RMI2Q96E14 147 aa20.78■□□□□ 0.92
LDB1-204ENST00000490751 BIN3Q9NQY0 253 aa20.78■□□□□ 0.92
LDB1-204ENST00000490751 COX11Q9Y6N1 276 aa20.78■□□□□ 0.92
LDB1-204ENST00000490751 LECT2O14960 151 aa20.77■□□□□ 0.92
LDB1-204ENST00000490751 ELOBQ15370 118 aa20.77■□□□□ 0.92
LDB1-204ENST00000490751 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.77■□□□□ 0.92
LDB1-204ENST00000490751 UBE2WQ96B02 151 aa20.77■□□□□ 0.92
LDB1-204ENST00000490751 XKRY2A2RUG3 117 aa20.76■□□□□ 0.91
LDB1-204ENST00000490751 EPM2AB3EWF7 344 aa20.76■□□□□ 0.91
LDB1-204ENST00000490751 CACNG7P62955 275 aa20.76■□□□□ 0.91
LDB1-204ENST00000490751 IGKV2D-24A0A075B6R9 120 aa20.75■□□□□ 0.91
LDB1-204ENST00000490751 TMEM262E9PQX1 116 aa20.75■□□□□ 0.91
LDB1-204ENST00000490751 MGPP08493 103 aa20.75■□□□□ 0.91
LDB1-204ENST00000490751 ALKAL2Q6UX46 152 aa20.74■□□□□ 0.91
LDB1-204ENST00000490751 BAALCQ8WXS3 180 aa20.74■□□□□ 0.91
LDB1-204ENST00000490751 FAT1Q14517 4588 aa20.73■□□□□ 0.91
LDB1-204ENST00000490751 F2Z2F3 143 aa20.72■□□□□ 0.91
LDB1-204ENST00000490751 TMEM70Q9BUB7 260 aa20.72■□□□□ 0.91
LDB1-204ENST00000490751 HAMPP81172 84 aa20.71■□□□□ 0.91
LDB1-204ENST00000490751 LYZL1Q6UWQ5 148 aa20.71■□□□□ 0.91
LDB1-204ENST00000490751 NUDT10Q8NFP7 164 aa20.71■□□□□ 0.91
LDB1-204ENST00000490751 NUDT11Q96G61 164 aa20.71■□□□□ 0.91
LDB1-204ENST00000490751 CHCHD5Q9BSY4 110 aa20.71■□□□□ 0.91
LDB1-204ENST00000490751 MPV17L2Q567V2 206 aa20.7■□□□□ 0.9
LDB1-204ENST00000490751 TMEM97Q5BJF2 176 aa20.7■□□□□ 0.9
LDB1-204ENST00000490751 NTM-AS1Q6ZSK4 140 aa20.7■□□□□ 0.9
LDB1-204ENST00000490751 DNAH8Q96JB1 4490 aa20.69■□□□□ 0.9
LDB1-204ENST00000490751 IGLV2-33A0A075B6J2 118 aaPredicted RBP20.69■□□□□ 0.9
LDB1-204ENST00000490751 M0QY20 66 aa20.69■□□□□ 0.9
LDB1-204ENST00000490751 BLOC1S1P78537 153 aa20.69■□□□□ 0.9
LDB1-204ENST00000490751 SUMO4Q6EEV6 95 aa20.69■□□□□ 0.9
LDB1-204ENST00000490751 H7C1H1 209 aa20.68■□□□□ 0.9
LDB1-204ENST00000490751 Q0VG73 95 aa20.68■□□□□ 0.9
LDB1-204ENST00000490751 ATRAIDQ6UW56 229 aa20.68■□□□□ 0.9
LDB1-204ENST00000490751 C15orf54Q8N8G6 183 aa20.68■□□□□ 0.9
LDB1-204ENST00000490751 TRGC1P0CF51 173 aa20.67■□□□□ 0.9
LDB1-204ENST00000490751 PKIAP61925 76 aa20.67■□□□□ 0.9
LDB1-204ENST00000490751 OCC1Q8TAD7 63 aa20.67■□□□□ 0.9
LDB1-204ENST00000490751 FRZBQ92765 325 aa20.67■□□□□ 0.9
LDB1-204ENST00000490751 K7EN84 100 aa20.66■□□□□ 0.9
LDB1-204ENST00000490751 CRPP02741 224 aa20.66■□□□□ 0.9
LDB1-204ENST00000490751 SMR3BP02814 79 aaPredicted RBP20.66■□□□□ 0.9
LDB1-204ENST00000490751 Q5VSD8 79 aa20.66■□□□□ 0.9
LDB1-204ENST00000490751 RNASE7Q9H1E1 156 aaKnown RBP20.66■□□□□ 0.9
LDB1-204ENST00000490751 ANGP03950 147 aaKnown RBP20.65■□□□□ 0.9
LDB1-204ENST00000490751 NTF3P20783 257 aa20.65■□□□□ 0.9
LDB1-204ENST00000490751 CTRLP40313 264 aa20.65■□□□□ 0.9
LDB1-204ENST00000490751 ENHOQ6UWT2 76 aa20.65■□□□□ 0.9
LDB1-204ENST00000490751 Q8N976 141 aa20.65■□□□□ 0.9
LDB1-204ENST00000490751 RPP21Q9H633 154 aaKnown RBP20.65■□□□□ 0.9
LDB1-204ENST00000490751 FAM30AQ9NZY2 134 aa20.65■□□□□ 0.9
LDB1-204ENST00000490751 C1orf43Q9BWL3 253 aa20.64■□□□□ 0.89
LDB1-204ENST00000490751 DPH3P1Q9H4G8 78 aa20.64■□□□□ 0.89
LDB1-204ENST00000490751 TRBV25-1A0A075B6N4 114 aa20.63■□□□□ 0.89
LDB1-204ENST00000490751 TMEM250H0YL14 139 aa20.62■□□□□ 0.89
LDB1-204ENST00000490751 GAGE6Q13070 117 aa20.62■□□□□ 0.89
LDB1-204ENST00000490751 WDR73Q6P4I2 378 aa20.62■□□□□ 0.89
LDB1-204ENST00000490751 LYPD6BQ8NI32 183 aa20.62■□□□□ 0.89
LDB1-204ENST00000490751 NKX2-5P52952 324 aaPredicted RBP20.61■□□□□ 0.89
LDB1-204ENST00000490751 RASL11AQ6T310 242 aa20.61■□□□□ 0.89
LDB1-204ENST00000490751 IQCJQ1A5X6 159 aa20.6■□□□□ 0.89
LDB1-204ENST00000490751 CNFNQ9BYD5 112 aa20.6■□□□□ 0.89
LDB1-204ENST00000490751 IGHV1-24A0A0C4DH33 117 aa20.59■□□□□ 0.89
LDB1-204ENST00000490751 RBX1P62877 108 aa20.59■□□□□ 0.89
LDB1-204ENST00000490751 TWIST1Q15672 202 aa20.59■□□□□ 0.89
LDB1-204ENST00000490751 CEBPGP53567 150 aa20.57■□□□□ 0.88
LDB1-204ENST00000490751 NIT2Q9NQR4 276 aa20.57■□□□□ 0.88
LDB1-204ENST00000490751 LINC01620Q4KN68 170 aa20.56■□□□□ 0.88
LDB1-204ENST00000490751 INAFM2P0DMQ5 153 aa20.55■□□□□ 0.88
LDB1-204ENST00000490751 MIAQ16674 131 aa20.55■□□□□ 0.88
LDB1-204ENST00000490751 CLPSL2Q6UWE3 100 aa20.55■□□□□ 0.88
LDB1-204ENST00000490751 Q6ZSA8 131 aa20.55■□□□□ 0.88
LDB1-204ENST00000490751 GTSF1Q8WW33 167 aa20.55■□□□□ 0.88
LDB1-204ENST00000490751 GATCO43716 136 aaKnown RBP20.54■□□□□ 0.88
LDB1-204ENST00000490751 PRR34Q9NV39 138 aa20.54■□□□□ 0.88
LDB1-204ENST00000490751 VPS13BQ7Z7G8 4022 aa20.54■□□□□ 0.88
LDB1-204ENST00000490751 FAM229AH3BQW9 127 aa20.53■□□□□ 0.88
LDB1-204ENST00000490751 LINC00269Q8N2A0 174 aa20.53■□□□□ 0.88
LDB1-204ENST00000490751 A0A1B0GVG6 124 aa20.52■□□□□ 0.88
LDB1-204ENST00000490751 HLA-DQA1P01909 254 aa20.52■□□□□ 0.88
LDB1-204ENST00000490751 FAM231DQ6ZW35 169 aa20.52■□□□□ 0.88
LDB1-204ENST00000490751 EIF5A2Q9GZV4 153 aaKnown RBP20.52■□□□□ 0.88
LDB1-204ENST00000490751 C14orf177Q52M58 125 aa20.51■□□□□ 0.87
LDB1-204ENST00000490751 DEFB104AQ8WTQ1 72 aa20.51■□□□□ 0.87
LDB1-204ENST00000490751 PGLYRP4Q96LB8 373 aa20.51■□□□□ 0.87
LDB1-204ENST00000490751 TMEM243Q9BU79 118 aa20.51■□□□□ 0.87
LDB1-204ENST00000490751 GATD1Q8NB37 220 aa20.49■□□□□ 0.87
LDB1-204ENST00000490751 TRAV26-2A0A0B4J265 109 aa20.48■□□□□ 0.87
LDB1-204ENST00000490751 FAM210AQ96ND0 272 aa20.48■□□□□ 0.87
LDB1-204ENST00000490751 SMIM7Q9BQ49 75 aa20.48■□□□□ 0.87
LDB1-204ENST00000490751 A8MWL6 223 aa20.47■□□□□ 0.87
LDB1-204ENST00000490751 USP17L23D6RBM5 183 aa20.47■□□□□ 0.87
LDB1-204ENST00000490751 SMIM15Q7Z3B0 74 aa20.47■□□□□ 0.87
LDB1-204ENST00000490751 COTL1Q14019 142 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms