RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 IL15RAQ13261 267 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 SAPCD1Q5SSQ6 148 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 PQLC2Q6ZP29 291 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 ZFP82Q8N141 532 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 TRAV1-1A0A0B4J248 108 aa8.16□□□□□ -1.1
EXOSC3-207ENST00000490516 A0A1B0GUV1 79 aa8.16□□□□□ -1.1
EXOSC3-207ENST00000490516 AQP10Q96PS8 301 aa8.16□□□□□ -1.1
EXOSC3-207ENST00000490516 TMSB15BA0A087X1C1 80 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 TRAV34A0A0B4J273 112 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 IGKV3OR2-268A0A0C4DH90 116 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 H3BMQ9 156 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 AMTP48728 403 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 CRIP1P50238 77 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 CYCSP99999 105 aaKnown RBP8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 PKIGQ9Y2B9 76 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 ARL2-SNX15V9GYD0 113 aa8.15□□□□□ -1.1
EXOSC3-207ENST00000490516 NAP1L6A6NFF2 107 aa8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 BTCP35070 178 aa8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 EPDR1Q9UM22 224 aa8.14□□□□□ -1.11
EXOSC3-207ENST00000490516 F5H697 171 aa8.13□□□□□ -1.11
EXOSC3-207ENST00000490516 ARL14EPLP0DKL9 152 aa8.13□□□□□ -1.11
EXOSC3-207ENST00000490516 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-207ENST00000490516 SUMO1P63165 101 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-207ENST00000490516 A0A1W2PPV4 95 aa8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 SH2D1AO60880 128 aa8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 TMBIM6P55061 237 aa8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 CHCHD10Q8WYQ3 142 aaPredicted RBP8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 SDHCQ99643 169 aaPredicted RBP8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 SEC22CQ9BRL7 303 aa8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 TMEM243Q9BU79 118 aa8.12□□□□□ -1.11
EXOSC3-207ENST00000490516 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
EXOSC3-207ENST00000490516 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
EXOSC3-207ENST00000490516 TRAV6A0A075B6T7 132 aa8.1□□□□□ -1.11
EXOSC3-207ENST00000490516 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
EXOSC3-207ENST00000490516 OR10AG1Q8NH19 301 aa8.1□□□□□ -1.11
EXOSC3-207ENST00000490516 DEFA3P59666 94 aa8.09□□□□□ -1.11
EXOSC3-207ENST00000490516 EIF5AP63241 154 aaKnown RBP8.09□□□□□ -1.11
EXOSC3-207ENST00000490516 LOC107984640A0A0U1RRK4 108 aa8.08□□□□□ -1.12
EXOSC3-207ENST00000490516 MUC21A0A140T8X8 626 aa8.08□□□□□ -1.12
EXOSC3-207ENST00000490516 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
EXOSC3-207ENST00000490516 FOXI1Q12951 378 aa8.08□□□□□ -1.12
EXOSC3-207ENST00000490516 Q86TA4 180 aa8.08□□□□□ -1.12
EXOSC3-207ENST00000490516 RBM38Q9H0Z9 239 aaKnown RBP8.08□□□□□ -1.12
EXOSC3-207ENST00000490516 A0A087WZ39 114 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 UBE2L6O14933 153 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 BCL2P10415 239 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 GCHFRP30047 84 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 RPL12P30050 165 aaKnown RBP8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 FAM162BQ5T6X4 162 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 SCGB1C1Q8TD33 95 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 RETNLBQ9BQ08 111 aa8.07□□□□□ -1.12
EXOSC3-207ENST00000490516 H0YIZ8 118 aa8.06□□□□□ -1.12
EXOSC3-207ENST00000490516 SSTP61278 116 aa8.06□□□□□ -1.12
EXOSC3-207ENST00000490516 TRIQKQ629K1 86 aa8.06□□□□□ -1.12
EXOSC3-207ENST00000490516 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
EXOSC3-207ENST00000490516 STAG3L2P0CL84 134 aa8.05□□□□□ -1.12
EXOSC3-207ENST00000490516 STAG3L3P0CL85 134 aa8.05□□□□□ -1.12
EXOSC3-207ENST00000490516 ZNF674Q2M3X9 581 aa8.05□□□□□ -1.12
EXOSC3-207ENST00000490516 LRRC37A5PQ49AS3 106 aa8.05□□□□□ -1.12
EXOSC3-207ENST00000490516 SMIM3Q9BZL3 60 aa8.05□□□□□ -1.12
EXOSC3-207ENST00000490516 IGHV1-58A0A0C4DH39 117 aa8.04□□□□□ -1.12
EXOSC3-207ENST00000490516 CENPXA8MT69 81 aa8.04□□□□□ -1.12
EXOSC3-207ENST00000490516 CDC34P49427 236 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-207ENST00000490516 NKX2-5P52952 324 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-207ENST00000490516 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-207ENST00000490516 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
EXOSC3-207ENST00000490516 A6NHS1 94 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 M0QY20 66 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 XCL1P47992 114 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 CNPY1Q3B7I2 92 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 COX8CQ7Z4L0 72 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 MLST8Q9BVC4 326 aa8.03□□□□□ -1.12
EXOSC3-207ENST00000490516 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 SIX6O95475 246 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 FGF6P10767 208 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 S100A5P33763 92 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 SPANXN1Q5VSR9 72 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 RAB24Q969Q5 203 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 HSPB11Q9Y547 144 aa8.02□□□□□ -1.13
EXOSC3-207ENST00000490516 PEX7O00628 323 aa8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 CRYGAP11844 174 aa8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 CAMPP49913 170 aa8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 RPP21Q9H633 154 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 WFDC1Q9HC57 220 aa8.01□□□□□ -1.13
EXOSC3-207ENST00000490516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
EXOSC3-207ENST00000490516 MGPP08493 103 aa8□□□□□ -1.13
EXOSC3-207ENST00000490516 MEF2BQ02080 365 aaPredicted RBP8□□□□□ -1.13
EXOSC3-207ENST00000490516 SUMO4Q6EEV6 95 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms