RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 FRZBQ92765 325 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
CLIC4-203ENST00000489758 H7C1H1 209 aa11.13□□□□□ -0.63
CLIC4-203ENST00000489758 SRIP30626 198 aa11.13□□□□□ -0.63
CLIC4-203ENST00000489758 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
CLIC4-203ENST00000489758 TMEM136Q6ZRR5 245 aa11.13□□□□□ -0.63
CLIC4-203ENST00000489758 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
CLIC4-203ENST00000489758 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
CLIC4-203ENST00000489758 TRBV7-3A0A075B6L6 115 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 ATP6V1G1O75348 118 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 UBE2D3P61077 147 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 UBE2D2P62837 147 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 NEGR1Q7Z3B1 354 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
CLIC4-203ENST00000489758 RPL39LQ96EH5 51 aaKnown RBP11.12□□□□□ -0.63
CLIC4-203ENST00000489758 NCR2O95944 276 aa11.11□□□□□ -0.63
CLIC4-203ENST00000489758 RPS10P46783 165 aaKnown RBP11.11□□□□□ -0.63
CLIC4-203ENST00000489758 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
CLIC4-203ENST00000489758 ESRGQ1W209 222 aa11.11□□□□□ -0.63
CLIC4-203ENST00000489758 SH2D6Q7Z4S9 175 aa11.11□□□□□ -0.63
CLIC4-203ENST00000489758 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
CLIC4-203ENST00000489758 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
CLIC4-203ENST00000489758 NIT2Q9NQR4 276 aa11.11□□□□□ -0.63
CLIC4-203ENST00000489758 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
CLIC4-203ENST00000489758 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
CLIC4-203ENST00000489758 NRACQ8N912 160 aa11.1□□□□□ -0.63
CLIC4-203ENST00000489758 ATP6V0E2Q8NHE4 81 aa11.1□□□□□ -0.63
CLIC4-203ENST00000489758 GNB1LQ9BYB4 327 aa11.1□□□□□ -0.63
CLIC4-203ENST00000489758 PLECQ15149 4684 aaKnown RBP11.09□□□□□ -0.63
CLIC4-203ENST00000489758 TENM2Q9NT68 2774 aa11.09□□□□□ -0.63
CLIC4-203ENST00000489758 TRBV6-5A0A0K0K1A5 114 aa11.09□□□□□ -0.63
CLIC4-203ENST00000489758 S100A1P23297 94 aa11.09□□□□□ -0.63
CLIC4-203ENST00000489758 TNFRSF18Q9Y5U5 241 aa11.09□□□□□ -0.63
CLIC4-203ENST00000489758 SCO1O75880 301 aa11.08□□□□□ -0.64
CLIC4-203ENST00000489758 TIRAPP58753 221 aa11.08□□□□□ -0.64
CLIC4-203ENST00000489758 LINC00476Q8WZB0 136 aa11.08□□□□□ -0.64
CLIC4-203ENST00000489758 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
CLIC4-203ENST00000489758 D6R8Y8 96 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 CKS2P33552 79 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 CCL18P55774 89 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 COX19Q49B96 90 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
CLIC4-203ENST00000489758 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
CLIC4-203ENST00000489758 PPBPP02775 128 aa11.06□□□□□ -0.64
CLIC4-203ENST00000489758 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
CLIC4-203ENST00000489758 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
CLIC4-203ENST00000489758 MRPS16Q9Y3D3 137 aaKnown RBP11.06□□□□□ -0.64
CLIC4-203ENST00000489758 LCE6AA0A183 80 aa11.05□□□□□ -0.64
CLIC4-203ENST00000489758 APCSP02743 223 aa11.05□□□□□ -0.64
CLIC4-203ENST00000489758 MT-ND6P03923 174 aa11.05□□□□□ -0.64
CLIC4-203ENST00000489758 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
CLIC4-203ENST00000489758 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 TNFRSF6BO95407 300 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 PPP1R17O96001 155 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 NPYP01303 97 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 TMEM70Q9BUB7 260 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
CLIC4-203ENST00000489758 ST20Q9HBF5 79 aa11.04□□□□□ -0.64
CLIC4-203ENST00000489758 COLCA2A8K830 154 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 PHOX2AO14813 284 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 LY6G6CO95867 125 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 POLR2KP53803 58 aaKnown RBP11.03□□□□□ -0.64
CLIC4-203ENST00000489758 KIAA1644Q3SXP7 199 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 LELP1Q5T871 98 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 PRELID3AQ96N28 172 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 C20orf78Q9BR46 151 aa11.03□□□□□ -0.64
CLIC4-203ENST00000489758 SUMO2P61956 95 aaKnown RBP11.02□□□□□ -0.65
CLIC4-203ENST00000489758 TRBV6-8A0A0A6YYG3 113 aa11.01□□□□□ -0.65
CLIC4-203ENST00000489758 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
CLIC4-203ENST00000489758 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
CLIC4-203ENST00000489758 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
CLIC4-203ENST00000489758 TRAPPC1Q9Y5R8 145 aa11.01□□□□□ -0.65
CLIC4-203ENST00000489758 I3L3M4 83 aa11□□□□□ -0.65
CLIC4-203ENST00000489758 FABP9Q0Z7S8 132 aa11□□□□□ -0.65
CLIC4-203ENST00000489758 WFDC10BQ8IUB3 73 aa11□□□□□ -0.65
CLIC4-203ENST00000489758 SREK1IP1Q8N9Q2 155 aaPredicted RBP11□□□□□ -0.65
CLIC4-203ENST00000489758 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
CLIC4-203ENST00000489758 ALKBH7Q9BT30 221 aaPredicted RBP11□□□□□ -0.65
CLIC4-203ENST00000489758 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
CLIC4-203ENST00000489758 TSHBP01222 138 aa10.99□□□□□ -0.65
CLIC4-203ENST00000489758 TMEM97Q5BJF2 176 aa10.99□□□□□ -0.65
CLIC4-203ENST00000489758 LYSTQ99698 3801 aa10.99□□□□□ -0.65
CLIC4-203ENST00000489758 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 VCYO14598 125 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 RAB5AP20339 215 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 PMCHP20382 165 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 COTL1Q14019 142 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 IQCJQ1A5X6 159 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 SMIM2Q9BVW6 85 aa10.98□□□□□ -0.65
CLIC4-203ENST00000489758 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
CLIC4-203ENST00000489758 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
CLIC4-203ENST00000489758 Q9H8V8 135 aa10.97□□□□□ -0.65
CLIC4-203ENST00000489758 IGHV1-24A0A0C4DH33 117 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms