RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 RIPPLY3P57055 190 aa19.14■□□□□ 0.65
HOXB3-210ENST00000489475 RPL32P62910 135 aaKnown RBP19.14■□□□□ 0.65
HOXB3-210ENST00000489475 Q6ZSN1 163 aa19.14■□□□□ 0.65
HOXB3-210ENST00000489475 TMEM70Q9BUB7 260 aa19.14■□□□□ 0.65
HOXB3-210ENST00000489475 IGHV4-28A0A0C4DH34 117 aa19.14■□□□□ 0.65
HOXB3-210ENST00000489475 SDHAF1A6NFY7 115 aa19.13■□□□□ 0.65
HOXB3-210ENST00000489475 CIDEAO60543 219 aa19.12■□□□□ 0.65
HOXB3-210ENST00000489475 LEPROTL1O95214 131 aa19.12■□□□□ 0.65
HOXB3-210ENST00000489475 POLR2KP53803 58 aaKnown RBP19.12■□□□□ 0.65
HOXB3-210ENST00000489475 LAGE3Q14657 143 aa19.12■□□□□ 0.65
HOXB3-210ENST00000489475 VCYO14598 125 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 TCAPO15273 167 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 SMIM6P0DI80 62 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 KPRPQ5T749 579 aaPredicted RBP19.11■□□□□ 0.65
HOXB3-210ENST00000489475 Q8NAQ8 132 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 TP53TG1Q9Y2A0 90 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 MGAM2Q2M2H8 2515 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 LYRM9A8MSI8 78 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 K7EMI3 77 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 HBDP02042 147 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 P0DMU3 169 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 FAM231AP0DMU4 169 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 FAM231CP0DMU5 169 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 DEFB130BP0DP73 79 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 DEFB130AP0DP74 79 aa19.11■□□□□ 0.65
HOXB3-210ENST00000489475 LINC00612Q8N6U2 182 aa19.1■□□□□ 0.65
HOXB3-210ENST00000489475 NBEAL1Q6ZS30 2694 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 A0A096LNJ9 63 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 PRB2P02812 416 aaPredicted RBP19.09■□□□□ 0.65
HOXB3-210ENST00000489475 KRTDAPP60985 99 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 PYY3Q5JQD4 70 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 HSPB8Q9UJY1 196 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 TNFRSF18Q9Y5U5 241 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 TRBV27A0A0K0K1C4 114 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 DEFB4AO15263 64 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 FCER1GP30273 86 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 FAM222AQ5U5X8 452 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 NEGR1Q7Z3B1 354 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 KIR2DL4Q99706 377 aa19.09■□□□□ 0.65
HOXB3-210ENST00000489475 ORMDL2Q53FV1 153 aa19.08■□□□□ 0.64
HOXB3-210ENST00000489475 JOSD1Q15040 202 aaPredicted RBP19.07■□□□□ 0.64
HOXB3-210ENST00000489475 C18orf15Q96N68 181 aa19.07■□□□□ 0.64
HOXB3-210ENST00000489475 DNAJC30Q96LL9 226 aa19.07■□□□□ 0.64
HOXB3-210ENST00000489475 LINC00518Q8N0U6 118 aa19.06■□□□□ 0.64
HOXB3-210ENST00000489475 NEXN-AS1Q8NBZ9 246 aa19.06■□□□□ 0.64
HOXB3-210ENST00000489475 DKK2Q9UBU2 259 aa19.06■□□□□ 0.64
HOXB3-210ENST00000489475 DNAH3Q8TD57 4116 aa19.05■□□□□ 0.64
HOXB3-210ENST00000489475 NUDT3O95989 172 aa19.05■□□□□ 0.64
HOXB3-210ENST00000489475 TRGV4A0A0C4DH28 118 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 K7EQD1 137 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 C3orf79P0CE67 100 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 LINC00173Q6ZV60 143 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 Q9UF83 564 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 K7EIL1 84 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 BTF3P20290 206 aaKnown RBP19.04■□□□□ 0.64
HOXB3-210ENST00000489475 C12orf57Q99622 126 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 RETNQ9HD89 108 aa19.04■□□□□ 0.64
HOXB3-210ENST00000489475 TRBV10-1A0A0K0K1A3 114 aa19.03■□□□□ 0.64
HOXB3-210ENST00000489475 SCGB1D1O95968 90 aa19.03■□□□□ 0.64
HOXB3-210ENST00000489475 SLC25A29Q8N8R3 303 aa19.03■□□□□ 0.64
HOXB3-210ENST00000489475 I3L3M4 83 aa19.02■□□□□ 0.64
HOXB3-210ENST00000489475 MAP1LC3CQ9BXW4 147 aa19.02■□□□□ 0.63
HOXB3-210ENST00000489475 SPART-AS1P0CW21 52 aa19.01■□□□□ 0.63
HOXB3-210ENST00000489475 S100A12P80511 92 aa19.01■□□□□ 0.63
HOXB3-210ENST00000489475 FHL2Q14192 279 aa19.01■□□□□ 0.63
HOXB3-210ENST00000489475 TRBV6-4A0A1B0GX49 114 aa19■□□□□ 0.63
HOXB3-210ENST00000489475 DEFB121Q5J5C9 76 aa19■□□□□ 0.63
HOXB3-210ENST00000489475 DEFB104AQ8WTQ1 72 aa19■□□□□ 0.63
HOXB3-210ENST00000489475 DAD1P61803 113 aa19■□□□□ 0.63
HOXB3-210ENST00000489475 G0S2P27469 103 aa18.99■□□□□ 0.63
HOXB3-210ENST00000489475 RPL36AP83881 106 aaKnown RBP18.99■□□□□ 0.63
HOXB3-210ENST00000489475 RPL36ALQ969Q0 106 aaKnown RBP18.99■□□□□ 0.63
HOXB3-210ENST00000489475 TRBV7-3A0A075B6L6 115 aa18.98■□□□□ 0.63
HOXB3-210ENST00000489475 ZNRF2Q8NHG8 242 aa18.98■□□□□ 0.63
HOXB3-210ENST00000489475 TSHBP01222 138 aa18.97■□□□□ 0.63
HOXB3-210ENST00000489475 SBSPONQ8IVN8 264 aa18.97■□□□□ 0.63
HOXB3-210ENST00000489475 CELA1Q9UNI1 258 aa18.97■□□□□ 0.63
HOXB3-210ENST00000489475 SYS1-DBNDD2H3BUS1 97 aa18.97■□□□□ 0.63
HOXB3-210ENST00000489475 RHOHQ15669 191 aa18.97■□□□□ 0.63
HOXB3-210ENST00000489475 TEX48A0A1B0GUV7 120 aa18.96■□□□□ 0.63
HOXB3-210ENST00000489475 IFI27L1Q96BM0 104 aa18.96■□□□□ 0.63
HOXB3-210ENST00000489475 C2orf66Q6UXQ4 117 aa18.95■□□□□ 0.62
HOXB3-210ENST00000489475 TOMM6Q96B49 74 aa18.95■□□□□ 0.62
HOXB3-210ENST00000489475 PRADC1Q9BSG0 188 aa18.95■□□□□ 0.62
HOXB3-210ENST00000489475 HHLA3Q9XRX5 114 aa18.95■□□□□ 0.62
HOXB3-210ENST00000489475 CYSLTR1Q9Y271 337 aa18.94■□□□□ 0.62
HOXB3-210ENST00000489475 ATP5LO75964 103 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 PHLDA1Q8WV24 401 aaPredicted RBP18.93■□□□□ 0.62
HOXB3-210ENST00000489475 GAGE12JA6NER3 117 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 LINC01549A6NIU2 74 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 H0Y8G0 127 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 GAGE1Q13065 139 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 GAGE4Q13068 117 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 GAGE5Q13069 117 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 GAGE13Q4V321 117 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 CDPF1Q6NVV7 123 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 PET117Q6UWS5 81 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 Q8N976 141 aa18.93■□□□□ 0.62
HOXB3-210ENST00000489475 SPATA25Q9BR10 227 aa18.92■□□□□ 0.62
HOXB3-210ENST00000489475 C11orf68Q9H3H3 251 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms