RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 Q9UF83 564 aa10.85□□□□□ -0.67
C9orf3-219ENST00000488186 TRAV8-6A0A0B4J262 113 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 M0QY20 66 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 APOC3P02656 99 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 C10orf91Q5T1B1 145 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 KCNIP4Q6PIL6 250 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
C9orf3-219ENST00000488186 CARHSP1Q9Y2V2 147 aaKnown RBP10.84□□□□□ -0.67
C9orf3-219ENST00000488186 M0R2N4 97 aa10.83□□□□□ -0.68
C9orf3-219ENST00000488186 TIRAPP58753 221 aa10.83□□□□□ -0.68
C9orf3-219ENST00000488186 HBBP68871 147 aa10.83□□□□□ -0.68
C9orf3-219ENST00000488186 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
C9orf3-219ENST00000488186 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
C9orf3-219ENST00000488186 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
C9orf3-219ENST00000488186 A0A087WWC5 75 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 SIVA1O15304 175 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 S100PP25815 95 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 UBE2D3P61077 147 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 UBE2D2P62837 147 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 LELP1Q5T871 98 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
C9orf3-219ENST00000488186 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 RHEBQ15382 184 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 DAZ4Q86SG3 579 aaKnown RBP10.81□□□□□ -0.68
C9orf3-219ENST00000488186 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 SLC7A5P1Q8MH63 180 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 SVBPQ8N300 66 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 FRZBQ92765 325 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 BTF3L4Q96K17 158 aa10.81□□□□□ -0.68
C9orf3-219ENST00000488186 DAZ3Q9NR90 486 aaKnown RBP10.81□□□□□ -0.68
C9orf3-219ENST00000488186 IGHV3-38A0A0C4DH36 116 aa10.8□□□□□ -0.68
C9orf3-219ENST00000488186 SNAPINO95295 136 aa10.8□□□□□ -0.68
C9orf3-219ENST00000488186 LINC00694P0DN24 101 aa10.8□□□□□ -0.68
C9orf3-219ENST00000488186 RAB4AP20338 218 aa10.8□□□□□ -0.68
C9orf3-219ENST00000488186 MRAP2Q96G30 205 aa10.8□□□□□ -0.68
C9orf3-219ENST00000488186 TRAV9-2A0A087WT02 112 aa10.79□□□□□ -0.68
C9orf3-219ENST00000488186 TMEM97Q5BJF2 176 aa10.79□□□□□ -0.68
C9orf3-219ENST00000488186 FAM104BQ5XKR9 115 aa10.79□□□□□ -0.68
C9orf3-219ENST00000488186 TMEM242Q9NWH2 141 aa10.79□□□□□ -0.68
C9orf3-219ENST00000488186 NBDYA0A0U1RRE5 68 aa10.78□□□□□ -0.68
C9orf3-219ENST00000488186 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
C9orf3-219ENST00000488186 WFDC10BQ8IUB3 73 aa10.78□□□□□ -0.68
C9orf3-219ENST00000488186 A0A1B0GXF2 115 aa10.77□□□□□ -0.69
C9orf3-219ENST00000488186 PPP1R17O96001 155 aa10.77□□□□□ -0.69
C9orf3-219ENST00000488186 CKS2P33552 79 aa10.77□□□□□ -0.69
C9orf3-219ENST00000488186 RPL39LQ96EH5 51 aaKnown RBP10.77□□□□□ -0.69
C9orf3-219ENST00000488186 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
C9orf3-219ENST00000488186 URGCP-MRPS24S4R325 110 aa10.77□□□□□ -0.69
C9orf3-219ENST00000488186 TRAV9-1A0A075B6T8 112 aa10.76□□□□□ -0.69
C9orf3-219ENST00000488186 MRPL51Q4U2R6 128 aaKnown RBP10.76□□□□□ -0.69
C9orf3-219ENST00000488186 ST20Q9HBF5 79 aa10.76□□□□□ -0.69
C9orf3-219ENST00000488186 TRBV6-8A0A0A6YYG3 113 aa10.75□□□□□ -0.69
C9orf3-219ENST00000488186 TMEM262E9PQX1 116 aa10.75□□□□□ -0.69
C9orf3-219ENST00000488186 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
C9orf3-219ENST00000488186 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
C9orf3-219ENST00000488186 NCR2O95944 276 aa10.74□□□□□ -0.69
C9orf3-219ENST00000488186 PMCHP20382 165 aa10.74□□□□□ -0.69
C9orf3-219ENST00000488186 COTL1Q14019 142 aa10.74□□□□□ -0.69
C9orf3-219ENST00000488186 CHCHD5Q9BSY4 110 aa10.74□□□□□ -0.69
C9orf3-219ENST00000488186 A0A087WX48 190 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 IGHV1-24A0A0C4DH33 117 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 SDHAF1A6NFY7 115 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 IGHV3-30P01768 117 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 IGHV3-33P01772 117 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 DNAH10OSP0CZ25 163 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 IGHV3-30-3P0DP02 117 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 IGHV3-30-5P0DP03 117 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 C1orf134Q5TEV5 83 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 C10orf126Q8N4M7 172 aa10.73□□□□□ -0.69
C9orf3-219ENST00000488186 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 K7EP13 123 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 PPBPP02775 128 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 PKIAP61925 76 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 Q6ZR54 194 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
C9orf3-219ENST00000488186 D6R8Y8 96 aa10.71□□□□□ -0.69
C9orf3-219ENST00000488186 I3L3M4 83 aa10.71□□□□□ -0.69
C9orf3-219ENST00000488186 GAS8-AS1O95177 125 aa10.71□□□□□ -0.69
C9orf3-219ENST00000488186 RPS10P46783 165 aaKnown RBP10.71□□□□□ -0.69
C9orf3-219ENST00000488186 TMEM136Q6ZRR5 245 aa10.71□□□□□ -0.69
C9orf3-219ENST00000488186 VCYO14598 125 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 UBE2L6O14933 153 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 AMTP48728 403 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 COX19Q49B96 90 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 DNAH10Q8IVF4 4471 aa10.7□□□□□ -0.7
C9orf3-219ENST00000488186 TNFRSF6BO95407 300 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 APCSP02743 223 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
C9orf3-219ENST00000488186 SUMO2P61956 95 aaKnown RBP10.69□□□□□ -0.7
C9orf3-219ENST00000488186 ELOBQ15370 118 aa10.69□□□□□ -0.7
C9orf3-219ENST00000488186 IQCJQ1A5X6 159 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms