RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 XCL2Q9UBD3 114 aa8.71□□□□□ -1.02
SND1-210ENST00000483503 LINC00482Q8N8I6 264 aa8.7□□□□□ -1.02
SND1-210ENST00000483503 C11orf72Q8NBR9 251 aa8.7□□□□□ -1.02
SND1-210ENST00000483503 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
SND1-210ENST00000483503 DKK2Q9UBU2 259 aa8.7□□□□□ -1.02
SND1-210ENST00000483503 I3L3M4 83 aa8.69□□□□□ -1.02
SND1-210ENST00000483503 DLEU1O43261 78 aa8.69□□□□□ -1.02
SND1-210ENST00000483503 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
SND1-210ENST00000483503 ZFP2Q6ZN57 461 aa8.69□□□□□ -1.02
SND1-210ENST00000483503 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
SND1-210ENST00000483503 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
SND1-210ENST00000483503 AKAP9Q99996 3911 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 WNK1Q9H4A3 2382 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 RS1O15537 224 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 KRTAP10-3P60369 221 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 NF1P21359 2839 aa8.68□□□□□ -1.02
SND1-210ENST00000483503 F8VRH5 84 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 SIVA1O15304 175 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 BATFQ16520 125 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 ANKRD39Q53RE8 183 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 PAPPA-AS1Q5QFB9 102 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 CFAP126Q5VTH2 177 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 TMEM263Q8WUH6 116 aaKnown RBP8.67□□□□□ -1.02
SND1-210ENST00000483503 C19orf73Q9NVV2 129 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
SND1-210ENST00000483503 TP53TG1Q9Y2A0 90 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
SND1-210ENST00000483503 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
SND1-210ENST00000483503 F8P00451 2351 aa8.66□□□□□ -1.02
SND1-210ENST00000483503 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
SND1-210ENST00000483503 STPG4Q8N801 248 aa8.66□□□□□ -1.02
SND1-210ENST00000483503 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
SND1-210ENST00000483503 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
SND1-210ENST00000483503 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
SND1-210ENST00000483503 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 A0A1B0GV90 55 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 CIDEAO60543 219 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 IGHV3-53P01767 116 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 NEGR1Q7Z3B1 354 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 GTSCR1Q86UQ5 136 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.02
SND1-210ENST00000483503 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
SND1-210ENST00000483503 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 TSHBP01222 138 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 NPSP0C0P6 89 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 AZU1P20160 251 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 NMUP48645 174 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 HINT1P49773 126 aaPredicted RBP8.64□□□□□ -1.03
SND1-210ENST00000483503 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
SND1-210ENST00000483503 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 ZC2HC1BQ5TFG8 222 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 OR4C5Q8NGB2 326 aa8.64□□□□□ -1.03
SND1-210ENST00000483503 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
SND1-210ENST00000483503 TRGV1A0A0A0MS02 117 aa8.63□□□□□ -1.03
SND1-210ENST00000483503 FGF6P10767 208 aa8.63□□□□□ -1.03
SND1-210ENST00000483503 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
SND1-210ENST00000483503 PMVKQ15126 192 aa8.63□□□□□ -1.03
SND1-210ENST00000483503 C20orf203Q8NBC4 194 aa8.63□□□□□ -1.03
SND1-210ENST00000483503 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
SND1-210ENST00000483503 TRAV4A0A0B4J268 109 aa8.62□□□□□ -1.03
SND1-210ENST00000483503 PRM2P04554 102 aa8.62□□□□□ -1.03
SND1-210ENST00000483503 GIG44P09565 113 aaPredicted RBP8.62□□□□□ -1.03
SND1-210ENST00000483503 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
SND1-210ENST00000483503 CITED1Q99966 193 aa8.62□□□□□ -1.03
SND1-210ENST00000483503 HIGD1BQ9P298 99 aa8.62□□□□□ -1.03
SND1-210ENST00000483503 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
SND1-210ENST00000483503 CRYBA4P53673 196 aa8.61□□□□□ -1.03
SND1-210ENST00000483503 HERVK_113P61574 105 aa8.61□□□□□ -1.03
SND1-210ENST00000483503 C2orf91Q6ZV80 131 aa8.61□□□□□ -1.03
SND1-210ENST00000483503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.61□□□□□ -1.03
SND1-210ENST00000483503 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
SND1-210ENST00000483503 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
SND1-210ENST00000483503 SEC11AP67812 179 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 HSD52Q0P140 79 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 COTL1Q14019 142 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 OVOL2Q9BRP0 275 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 WFDC10AQ9H1F0 79 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
SND1-210ENST00000483503 P0DMU3 169 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 FAM231AP0DMU4 169 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 FAM231CP0DMU5 169 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 OR11H2Q8NH07 326 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
SND1-210ENST00000483503 NSD1Q96L73 2696 aaPredicted RBP8.58□□□□□ -1.04
SND1-210ENST00000483503 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
SND1-210ENST00000483503 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
SND1-210ENST00000483503 Q6ZSN1 163 aa8.58□□□□□ -1.04
SND1-210ENST00000483503 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
SND1-210ENST00000483503 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms