RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 LINC00588Q9Y4M8 146 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 TRBV10-1A0A0K0K1A3 114 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 RPL36AP83881 106 aaKnown RBP12.32□□□□□ -0.44
CPNE1-224ENST00000483359 ATRAIDQ6UW56 229 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 ATP5L2Q7Z4Y8 100 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 RPL36ALQ969Q0 106 aaKnown RBP12.32□□□□□ -0.44
CPNE1-224ENST00000483359 BTF3L4Q96K17 158 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 IMMP2LQ96T52 175 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 TMEM242Q9NWH2 141 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 A0A1B0GW15 77 aa12.31□□□□□ -0.44
CPNE1-224ENST00000483359 H7C1H1 209 aa12.31□□□□□ -0.44
CPNE1-224ENST00000483359 S100PP25815 95 aa12.31□□□□□ -0.44
CPNE1-224ENST00000483359 ATP6V0E2Q8NHE4 81 aa12.31□□□□□ -0.44
CPNE1-224ENST00000483359 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
CPNE1-224ENST00000483359 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 LCE6AA0A183 80 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 RAB4AP20338 218 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
CPNE1-224ENST00000483359 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
CPNE1-224ENST00000483359 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
CPNE1-224ENST00000483359 NCR2O95944 276 aa12.29□□□□□ -0.44
CPNE1-224ENST00000483359 S100A8P05109 93 aa12.29□□□□□ -0.44
CPNE1-224ENST00000483359 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
CPNE1-224ENST00000483359 TNFRSF18Q9Y5U5 241 aa12.29□□□□□ -0.44
CPNE1-224ENST00000483359 UBE2D3P61077 147 aa12.28□□□□□ -0.44
CPNE1-224ENST00000483359 UBE2D2P62837 147 aa12.28□□□□□ -0.44
CPNE1-224ENST00000483359 FAM104BQ5XKR9 115 aa12.28□□□□□ -0.44
CPNE1-224ENST00000483359 SH2D6Q7Z4S9 175 aa12.28□□□□□ -0.44
CPNE1-224ENST00000483359 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.44
CPNE1-224ENST00000483359 NIT2Q9NQR4 276 aa12.27□□□□□ -0.44
CPNE1-224ENST00000483359 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
CPNE1-224ENST00000483359 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
CPNE1-224ENST00000483359 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
CPNE1-224ENST00000483359 MRPS16Q9Y3D3 137 aaKnown RBP12.26□□□□□ -0.45
CPNE1-224ENST00000483359 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 KMT2AQ03164 3969 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 RYR2Q92736 4967 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 TRAV9-1A0A075B6T8 112 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 OR10J3Q5JRS4 329 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 DNAJC30Q96LL9 226 aa12.25□□□□□ -0.45
CPNE1-224ENST00000483359 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
CPNE1-224ENST00000483359 CKS2P33552 79 aa12.23□□□□□ -0.45
CPNE1-224ENST00000483359 ELOBQ15370 118 aa12.23□□□□□ -0.45
CPNE1-224ENST00000483359 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
CPNE1-224ENST00000483359 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
CPNE1-224ENST00000483359 D6R8Y8 96 aa12.23□□□□□ -0.45
CPNE1-224ENST00000483359 RYR3Q15413 4870 aa12.22□□□□□ -0.45
CPNE1-224ENST00000483359 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
CPNE1-224ENST00000483359 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-224ENST00000483359 UPK3BQ9BT76 320 aa12.22□□□□□ -0.45
CPNE1-224ENST00000483359 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
CPNE1-224ENST00000483359 Q9H8V8 135 aa12.21□□□□□ -0.45
CPNE1-224ENST00000483359 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
CPNE1-224ENST00000483359 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.46
CPNE1-224ENST00000483359 M0R2N4 97 aa12.21□□□□□ -0.46
CPNE1-224ENST00000483359 LELP1Q5T871 98 aa12.21□□□□□ -0.46
CPNE1-224ENST00000483359 FRZBQ92765 325 aa12.21□□□□□ -0.46
CPNE1-224ENST00000483359 TIRAPP58753 221 aa12.2□□□□□ -0.46
CPNE1-224ENST00000483359 NRACQ8N912 160 aa12.2□□□□□ -0.46
CPNE1-224ENST00000483359 ST20Q9HBF5 79 aa12.2□□□□□ -0.46
CPNE1-224ENST00000483359 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
CPNE1-224ENST00000483359 SIVA1O15304 175 aa12.19□□□□□ -0.46
CPNE1-224ENST00000483359 TRBV6-8A0A0A6YYG3 113 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 NPYP01303 97 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 NTM-AS1Q6ZSK4 140 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 ORMDL3Q8N138 153 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 TRBV6-5A0A0K0K1A5 114 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 TNFRSF6BO95407 300 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 TMEM70Q9BUB7 260 aa12.18□□□□□ -0.46
CPNE1-224ENST00000483359 HLA-DQA1P01909 254 aa12.17□□□□□ -0.46
CPNE1-224ENST00000483359 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
CPNE1-224ENST00000483359 Q8N3U1 123 aa12.17□□□□□ -0.46
CPNE1-224ENST00000483359 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
CPNE1-224ENST00000483359 GNB1LQ9BYB4 327 aa12.17□□□□□ -0.46
CPNE1-224ENST00000483359 TRBV24-1A0A075B6N3 115 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 SCO1O75880 301 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 APCSP02743 223 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 PPBPP02775 128 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 PPP1R17O96001 155 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 COTL1Q14019 142 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 YPEL4Q96NS1 127 aa12.16□□□□□ -0.46
CPNE1-224ENST00000483359 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 PMCHP20382 165 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 DNAH6Q9C0G6 4158 aa12.15□□□□□ -0.46
CPNE1-224ENST00000483359 I3L3M4 83 aa12.14□□□□□ -0.47
CPNE1-224ENST00000483359 KRTAP1-5Q9BYS1 174 aa12.14□□□□□ -0.47
CPNE1-224ENST00000483359 MRPL18Q9H0U6 180 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms