RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 TRBV7-3A0A075B6L6 115 aa14.4□□□□□ -0.1
VPS16-207ENST00000481812 LOC100131303A0A0U1RQF7 123 aa14.4□□□□□ -0.1
VPS16-207ENST00000481812 NUDT3O95989 172 aa14.4□□□□□ -0.1
VPS16-207ENST00000481812 MRPL51Q4U2R6 128 aaKnown RBP14.4□□□□□ -0.1
VPS16-207ENST00000481812 TGIF2-C20orf24A0A0A6YYL0 155 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 HLA-DQA1P01909 254 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 P0DMU3 169 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 FAM231AP0DMU4 169 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 FAM231CP0DMU5 169 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 SRIP30626 198 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 NEGR1Q7Z3B1 354 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 CBLN2Q8IUK8 224 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 Q9UF83 564 aa14.39□□□□□ -0.11
VPS16-207ENST00000481812 PPP1R17O96001 155 aa14.38□□□□□ -0.11
VPS16-207ENST00000481812 PPBPP02775 128 aa14.38□□□□□ -0.11
VPS16-207ENST00000481812 MT-ND6P03923 174 aa14.38□□□□□ -0.11
VPS16-207ENST00000481812 TRAV26-2A0A0B4J265 109 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 GAGE12JA6NER3 117 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 GAGE1Q13065 139 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 GAGE4Q13068 117 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 GAGE5Q13069 117 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 ZNRF2Q8NHG8 242 aa14.37□□□□□ -0.11
VPS16-207ENST00000481812 TRBV6-5A0A0K0K1A5 114 aa14.36□□□□□ -0.11
VPS16-207ENST00000481812 UBE2D3P61077 147 aa14.36□□□□□ -0.11
VPS16-207ENST00000481812 UBE2D2P62837 147 aa14.36□□□□□ -0.11
VPS16-207ENST00000481812 TNFRSF18Q9Y5U5 241 aa14.36□□□□□ -0.11
VPS16-207ENST00000481812 CKS2P33552 79 aa14.35□□□□□ -0.11
VPS16-207ENST00000481812 TIRAPP58753 221 aa14.35□□□□□ -0.11
VPS16-207ENST00000481812 ATP6V0E2Q8NHE4 81 aa14.35□□□□□ -0.11
VPS16-207ENST00000481812 PLECQ15149 4684 aaKnown RBP14.35□□□□□ -0.11
VPS16-207ENST00000481812 OR10J3Q5JRS4 329 aa14.34□□□□□ -0.11
VPS16-207ENST00000481812 PHOX2AO14813 284 aa14.33□□□□□ -0.12
VPS16-207ENST00000481812 DAZ4Q86SG3 579 aaKnown RBP14.33□□□□□ -0.12
VPS16-207ENST00000481812 ORMDL3Q8N138 153 aa14.33□□□□□ -0.12
VPS16-207ENST00000481812 NRACQ8N912 160 aa14.33□□□□□ -0.12
VPS16-207ENST00000481812 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.33□□□□□ -0.12
VPS16-207ENST00000481812 RPL39LQ96EH5 51 aaKnown RBP14.33□□□□□ -0.12
VPS16-207ENST00000481812 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
VPS16-207ENST00000481812 DAZ3Q9NR90 486 aaKnown RBP14.33□□□□□ -0.12
VPS16-207ENST00000481812 LAMTOR2Q9Y2Q5 125 aa14.33□□□□□ -0.12
VPS16-207ENST00000481812 D6R8Y8 96 aa14.32□□□□□ -0.12
VPS16-207ENST00000481812 GAS8-AS1O95177 125 aa14.32□□□□□ -0.12
VPS16-207ENST00000481812 APCSP02743 223 aa14.32□□□□□ -0.12
VPS16-207ENST00000481812 LYPD5Q6UWN5 251 aa14.32□□□□□ -0.12
VPS16-207ENST00000481812 SMKR1H3BMG3 65 aa14.31□□□□□ -0.12
VPS16-207ENST00000481812 NCR2O95944 276 aa14.31□□□□□ -0.12
VPS16-207ENST00000481812 RPS10P46783 165 aaKnown RBP14.31□□□□□ -0.12
VPS16-207ENST00000481812 CCL18P55774 89 aa14.31□□□□□ -0.12
VPS16-207ENST00000481812 ESRGQ1W209 222 aa14.31□□□□□ -0.12
VPS16-207ENST00000481812 ST20Q9HBF5 79 aa14.31□□□□□ -0.12
VPS16-207ENST00000481812 SCO1O75880 301 aa14.3□□□□□ -0.12
VPS16-207ENST00000481812 TMEM97Q5BJF2 176 aa14.3□□□□□ -0.12
VPS16-207ENST00000481812 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
VPS16-207ENST00000481812 PRELID3AQ96N28 172 aa14.3□□□□□ -0.12
VPS16-207ENST00000481812 C20orf78Q9BR46 151 aa14.3□□□□□ -0.12
VPS16-207ENST00000481812 MRPL18Q9H0U6 180 aaKnown RBP14.3□□□□□ -0.12
VPS16-207ENST00000481812 SDHAF1A6NFY7 115 aa14.29□□□□□ -0.12
VPS16-207ENST00000481812 COLCA2A8K830 154 aa14.29□□□□□ -0.12
VPS16-207ENST00000481812 TNFRSF6BO95407 300 aa14.29□□□□□ -0.12
VPS16-207ENST00000481812 POLR2KP53803 58 aaKnown RBP14.29□□□□□ -0.12
VPS16-207ENST00000481812 RPL32P62910 135 aaKnown RBP14.29□□□□□ -0.12
VPS16-207ENST00000481812 TRAPPC1Q9Y5R8 145 aa14.29□□□□□ -0.12
VPS16-207ENST00000481812 SUMO2P61956 95 aaKnown RBP14.28□□□□□ -0.12
VPS16-207ENST00000481812 TMEM70Q9BUB7 260 aa14.28□□□□□ -0.12
VPS16-207ENST00000481812 PRSS47A8MTI9 375 aa14.27□□□□□ -0.13
VPS16-207ENST00000481812 FABP9Q0Z7S8 132 aa14.27□□□□□ -0.13
VPS16-207ENST00000481812 UPK3BQ9BT76 320 aa14.27□□□□□ -0.13
VPS16-207ENST00000481812 MRPS16Q9Y3D3 137 aaKnown RBP14.27□□□□□ -0.13
VPS16-207ENST00000481812 LINC00588Q9Y4M8 146 aa14.27□□□□□ -0.13
VPS16-207ENST00000481812 TRBV27A0A0K0K1C4 114 aa14.26□□□□□ -0.13
VPS16-207ENST00000481812 NPYP01303 97 aa14.26□□□□□ -0.13
VPS16-207ENST00000481812 LELP1Q5T871 98 aa14.26□□□□□ -0.13
VPS16-207ENST00000481812 VCYO14598 125 aa14.25□□□□□ -0.13
VPS16-207ENST00000481812 KIAA1644Q3SXP7 199 aa14.25□□□□□ -0.13
VPS16-207ENST00000481812 IGHV3-38A0A0C4DH36 116 aa14.24□□□□□ -0.13
VPS16-207ENST00000481812 I3L3M4 83 aa14.24□□□□□ -0.13
VPS16-207ENST00000481812 UBE2DNLQ8IWF7 75 aa14.24□□□□□ -0.13
VPS16-207ENST00000481812 ALKBH7Q9BT30 221 aaPredicted RBP14.24□□□□□ -0.13
VPS16-207ENST00000481812 TRBV6-8A0A0A6YYG3 113 aa14.23□□□□□ -0.13
VPS16-207ENST00000481812 RAB5AP20339 215 aa14.23□□□□□ -0.13
VPS16-207ENST00000481812 PMCHP20382 165 aa14.23□□□□□ -0.13
VPS16-207ENST00000481812 COTL1Q14019 142 aa14.23□□□□□ -0.13
VPS16-207ENST00000481812 LINC00476Q8WZB0 136 aa14.23□□□□□ -0.13
VPS16-207ENST00000481812 NTM-AS1Q6ZSK4 140 aa14.22□□□□□ -0.13
VPS16-207ENST00000481812 SMIM2Q9BVW6 85 aa14.22□□□□□ -0.13
VPS16-207ENST00000481812 MAP1LC3AQ9H492 121 aa14.22□□□□□ -0.13
VPS16-207ENST00000481812 TRAV8-6A0A0B4J262 113 aa14.21□□□□□ -0.13
VPS16-207ENST00000481812 TCAPO15273 167 aa14.21□□□□□ -0.13
VPS16-207ENST00000481812 IQCJQ1A5X6 159 aa14.21□□□□□ -0.13
VPS16-207ENST00000481812 KIR2DL4Q99706 377 aa14.2□□□□□ -0.14
VPS16-207ENST00000481812 LYSTQ99698 3801 aa14.2□□□□□ -0.14
VPS16-207ENST00000481812 TRBV25-1A0A075B6N4 114 aa14.19□□□□□ -0.14
VPS16-207ENST00000481812 IGHV1-24A0A0C4DH33 117 aa14.19□□□□□ -0.14
VPS16-207ENST00000481812 VPS13DQ5THJ4 4388 aa14.19□□□□□ -0.14
VPS16-207ENST00000481812 ALMS1Q8TCU4 4167 aa14.19□□□□□ -0.14
VPS16-207ENST00000481812 IGLV2-18A0A075B6J9 118 aa14.18□□□□□ -0.14
VPS16-207ENST00000481812 TSHBP01222 138 aa14.18□□□□□ -0.14
VPS16-207ENST00000481812 NXT2Q9NPJ8 142 aaKnown RBP14.18□□□□□ -0.14
VPS16-207ENST00000481812 K7EMI3 77 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms