RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 FXYD5Q96DB9 178 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 RHPN1-AS1Q9BWJ2 59 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 NKX6-2Q9C056 277 aaPredicted RBP1.94□□□□□ -2.1
CBX3-207ENST00000481300 SMDT1Q9H4I9 107 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 OTORQ9NRC9 128 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 ZNF586Q9NXT0 402 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 SMPXQ9UHP9 88 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 EPDR1Q9UM22 224 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 ARL2-SNX15V9GYD0 113 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 OTOGQ6ZRI0 2925 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 MTORP42345 2549 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 NAV3Q8IVL0 2385 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 ITPR3Q14573 2671 aa1.94□□□□□ -2.1
CBX3-207ENST00000481300 MYO9AB2RTY4 2548 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 KIAA2026Q5HYC2 2103 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 MAP1AP78559 2803 aaPredicted RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 IGKV3-7A0A075B6H7 116 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 TRBV19A0A075B6N1 114 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 TMEM213A2RRL7 107 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 C2orf70A6NJV1 201 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 GGTLC3B5MD39 225 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 TMEM250H0YL14 139 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 NDUFS5O43920 106 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 NDUFS6O75380 124 aaKnown RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 APOC3P02656 99 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 SLC25A5P05141 298 aaKnown RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 PFN1P07737 140 aaKnown RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 SRP19P09132 144 aaKnown RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 IGLC2P0DOY2 106 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 CBLN1P23435 193 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 CSN1S1P47710 185 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 PSG9Q00887 426 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 PDE6HQ13956 83 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 TMEM241Q24JQ0 296 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 TCF24Q7RTU0 167 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 NDUFA11Q86Y39 141 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 EXOC3-AS1Q8N2X6 119 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 CMTM2Q8TAZ6 248 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 HIST1H2BAQ96A08 127 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 LINC00052Q96N35 136 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 SMIM7Q9BQ49 75 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 TCEAL7Q9BRU2 100 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 SEC11CQ9BY50 192 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 SONP18583 2426 aaKnown RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 CHD3Q12873 2000 aaKnown RBP1.93□□□□□ -2.1
CBX3-207ENST00000481300 SVEP1Q4LDE5 3571 aa1.93□□□□□ -2.1
CBX3-207ENST00000481300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.92□□□□□ -2.13e-9■■■■■ 34.1
CBX3-207ENST00000481300 TLN2Q9Y4G6 2542 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 TANC2Q9HCD6 1990 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ANKRD17O75179 2603 aaKnown RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 FLNAP21333 2647 aaKnown RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 HIVEP1P15822 2718 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ABCA1O95477 2261 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 TRAV8-2A0A0B4J237 113 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ZNF727A8MUV8 499 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ZNF705FA8MVS1 300 aaPredicted RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 A8MWP6 167 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 M0R036 132 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 M0R3E3 92 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 SLC17A3O00476 420 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ISLRO14498 428 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 OVOL1O14753 267 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 TCRAP04437 139 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 S100A9P06702 114 aaKnown RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 OR5AL1P0C617 328 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 PRB4P10163 310 aaPredicted RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 ADCYAP1P18509 176 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 HLA-DMBP28068 263 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 AKR1C3P42330 323 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 GNG4P50150 75 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 SNRPD3P62318 126 aaKnown RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 GNG5P63218 68 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 PMVKQ15126 192 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 PSG3Q16557 428 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 DEFB114Q30KQ6 69 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 C10orf91Q5T1B1 145 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 SAMD13Q5VXD3 122 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ZFAND6Q6FIF0 208 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 GOLT1AQ6ZVE7 132 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 PRNTQ86SH4 94 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 SVBPQ8N300 66 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 C3orf56Q8N813 242 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 C5orf17Q8NAS9 161 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ZNF738Q8NE65 137 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 DYNLRB2Q8TF09 96 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ORAOV1Q8WV07 137 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 TVP23CQ96ET8 276 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 SLC50A1Q9BRV3 221 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 DERL1Q9BUN8 251 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 MS4A6AQ9H2W1 248 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 NAT8Q9UHE5 227 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 PRELID1Q9Y255 219 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 CARHSP1Q9Y2V2 147 aaKnown RBP1.92□□□□□ -2.1
CBX3-207ENST00000481300 BAHCC1Q9P281 2608 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ZANQ9Y493 2812 aa1.92□□□□□ -2.1
CBX3-207ENST00000481300 ARHGAP32A7KAX9 2087 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms