RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 C20orf173Q96LM9 149 aa12.58□□□□□ -0.4
FGFR3-208ENST00000481110 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
FGFR3-208ENST00000481110 TRBV20-1A0A075B6N2 111 aa12.58□□□□□ -0.4
FGFR3-208ENST00000481110 TIMM21Q9BVV7 248 aa12.57□□□□□ -0.4
FGFR3-208ENST00000481110 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
FGFR3-208ENST00000481110 SRSF2Q01130 221 aaKnown RBP12.57□□□□□ -0.4
FGFR3-208ENST00000481110 FGF6P10767 208 aa12.57□□□□□ -0.4
FGFR3-208ENST00000481110 RPL39P62891 51 aaKnown RBP12.57□□□□□ -0.4
FGFR3-208ENST00000481110 SUMO4Q6EEV6 95 aa12.57□□□□□ -0.4
FGFR3-208ENST00000481110 ODF1Q14990 250 aa12.56□□□□□ -0.4
FGFR3-208ENST00000481110 U3KQE9 123 aa12.56□□□□□ -0.4
FGFR3-208ENST00000481110 A0A087WX48 190 aa12.56□□□□□ -0.4
FGFR3-208ENST00000481110 TRAV26-1A0A087WT03 109 aa12.56□□□□□ -0.4
FGFR3-208ENST00000481110 TRBV6-1A0A0K0K1D8 114 aa12.56□□□□□ -0.4
FGFR3-208ENST00000481110 B5MCH6 92 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 RHODO00212 210 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
FGFR3-208ENST00000481110 C2orf82Q6UX34 121 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 Q6ZQT7 251 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 PPDPFLQ8WWR9 84 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 SS18L2Q9UHA2 77 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 CFAP47Q6ZTR5 3102 aa12.55□□□□□ -0.4
FGFR3-208ENST00000481110 K7EMT4 169 aa12.54□□□□□ -0.4
FGFR3-208ENST00000481110 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
FGFR3-208ENST00000481110 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
FGFR3-208ENST00000481110 TRBV7-9A0A0J9YWB2 115 aa12.54□□□□□ -0.4
FGFR3-208ENST00000481110 IGHG4P01861 327 aa12.54□□□□□ -0.4
FGFR3-208ENST00000481110 LINC00158P58513 81 aa12.54□□□□□ -0.4
FGFR3-208ENST00000481110 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
FGFR3-208ENST00000481110 SPTBN5Q9NRC6 3674 aaKnown RBP12.54□□□□□ -0.4
FGFR3-208ENST00000481110 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.53□□□□□ -0.4
FGFR3-208ENST00000481110 TRAV8-3A0A0A6YYJ7 113 aa12.53□□□□□ -0.4
FGFR3-208ENST00000481110 IGKV2-29A2NJV5 120 aaPredicted RBP12.53□□□□□ -0.4
FGFR3-208ENST00000481110 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
FGFR3-208ENST00000481110 MAST4O15021 2626 aa12.53□□□□□ -0.4
FGFR3-208ENST00000481110 IGLC6P0CF74 106 aa12.53□□□□□ -0.4
FGFR3-208ENST00000481110 PRIMA1Q86XR5 153 aa12.53□□□□□ -0.4
FGFR3-208ENST00000481110 DNAL4O96015 105 aa12.52□□□□□ -0.4
FGFR3-208ENST00000481110 KRTAP10-9P60411 292 aa12.52□□□□□ -0.4
FGFR3-208ENST00000481110 ESM1Q9NQ30 184 aa12.52□□□□□ -0.4
FGFR3-208ENST00000481110 M0R2P5 195 aa12.52□□□□□ -0.41
FGFR3-208ENST00000481110 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
FGFR3-208ENST00000481110 CITED2Q99967 270 aaPredicted RBP12.52□□□□□ -0.41
FGFR3-208ENST00000481110 AGRNO00468 2067 aa12.52□□□□□ -0.41
FGFR3-208ENST00000481110 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
FGFR3-208ENST00000481110 A0A0J9YX75 114 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 SCGB1A1P11684 91 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 DEFB121Q5J5C9 76 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 CFAP46Q8IYW2 2715 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 MALP21145 153 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 NTN5Q8WTR8 489 aaPredicted RBP12.51□□□□□ -0.41
FGFR3-208ENST00000481110 TMEM141Q96I45 108 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 GAS8-AS1O95177 125 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
FGFR3-208ENST00000481110 GAGE6Q13070 117 aa12.5□□□□□ -0.41
FGFR3-208ENST00000481110 SLC25A20O43772 301 aa12.5□□□□□ -0.41
FGFR3-208ENST00000481110 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
FGFR3-208ENST00000481110 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
FGFR3-208ENST00000481110 CFAP161Q6P656 301 aa12.49□□□□□ -0.41
FGFR3-208ENST00000481110 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
FGFR3-208ENST00000481110 A0A0J9YXV3 536 aa12.49□□□□□ -0.41
FGFR3-208ENST00000481110 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
FGFR3-208ENST00000481110 F8W735 103 aaPredicted RBP12.48□□□□□ -0.41
FGFR3-208ENST00000481110 J3QQQ9 107 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 EDN2P20800 178 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 OPRPNQ99935 248 aaPredicted RBP12.48□□□□□ -0.41
FGFR3-208ENST00000481110 CLPSL2Q6UWE3 100 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 ZFAND2AQ8N6M9 145 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 CRYBA4P53673 196 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 TAL2Q16559 108 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
FGFR3-208ENST00000481110 MAPKAPK5-AS1Q8N8E1 139 aa12.48□□□□□ -0.41
FGFR3-208ENST00000481110 CLPSL1A2RUU4 121 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 C6orf226Q5I0X4 101 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 PRR9Q5T870 116 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 ATXN8Q156A1 80 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 C3orf56Q8N813 242 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
FGFR3-208ENST00000481110 INSL3P51460 131 aa12.46□□□□□ -0.41
FGFR3-208ENST00000481110 F5H768 121 aa12.46□□□□□ -0.41
FGFR3-208ENST00000481110 P0DMU3 169 aa12.46□□□□□ -0.41
FGFR3-208ENST00000481110 FAM231AP0DMU4 169 aa12.46□□□□□ -0.41
FGFR3-208ENST00000481110 FAM231CP0DMU5 169 aa12.46□□□□□ -0.41
FGFR3-208ENST00000481110 RASL10AQ92737 203 aa12.46□□□□□ -0.41
FGFR3-208ENST00000481110 PAX4O43316 350 aa12.46□□□□□ -0.42
FGFR3-208ENST00000481110 PRM2P04554 102 aa12.46□□□□□ -0.42
FGFR3-208ENST00000481110 FOXI1Q12951 378 aa12.46□□□□□ -0.42
FGFR3-208ENST00000481110 C18orf65Q6ZTR6 163 aa12.46□□□□□ -0.42
FGFR3-208ENST00000481110 PTPRBP23467 1997 aa12.45□□□□□ -0.42
FGFR3-208ENST00000481110 Q6YL49 198 aa12.45□□□□□ -0.42
FGFR3-208ENST00000481110 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
FGFR3-208ENST00000481110 HIGD1BQ9P298 99 aa12.45□□□□□ -0.42
FGFR3-208ENST00000481110 F8P00451 2351 aa12.45□□□□□ -0.42
FGFR3-208ENST00000481110 DEFB4AO15263 64 aa12.45□□□□□ -0.42
FGFR3-208ENST00000481110 K7EQG2 157 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms