RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SFRP2Q96HF1 295 aa4.23□□□□□ -1.73
LRCH3-216ENST00000481048 DAZ3Q9NR90 486 aaKnown RBP4.23□□□□□ -1.73
LRCH3-216ENST00000481048 ARL2-SNX15V9GYD0 113 aa4.23□□□□□ -1.73
LRCH3-216ENST00000481048 TRBV7-3A0A075B6L6 115 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 A0A087WX48 190 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 TRAV34A0A0B4J273 112 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 TRBV6-1A0A0K0K1D8 114 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 RBFOX3A6NFN3 312 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 FAM74A7A6NL05 159 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 KRBOX1C9JBD0 128 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 PEX7O00628 323 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 ARMS2P0C7Q2 107 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 TPT1P13693 172 aaKnown RBP4.22□□□□□ -1.73
LRCH3-216ENST00000481048 FHITP49789 147 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 HAMPP81172 84 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 WFDC2Q14508 124 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 C14orf178Q8N769 122 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-216ENST00000481048 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-216ENST00000481048 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 FMC1Q96HJ9 113 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 CHAC1Q9BUX1 264 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 SAMD10Q9BYL1 202 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 MED28Q9H204 178 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 JPT2Q9H910 190 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 PHLDA3Q9Y5J5 127 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 ALG5Q9Y673 324 aa4.22□□□□□ -1.73
LRCH3-216ENST00000481048 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-216ENST00000481048 IGKV2D-24A0A075B6R9 120 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 H3BVH4 76 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 PTTG1O95997 202 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 OXTP01178 125 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 IGLV2-8P01709 118 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 GIPP09681 153 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-216ENST00000481048 CRIP1P50238 77 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 PKIAP61925 76 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 UBE2G1P62253 170 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 ZNF674Q2M3X9 581 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 AKR1C8PQ5T2L2 129 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 Q86TA4 180 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 ZFP82Q8N141 532 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 OR10G8Q8NGN5 311 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 Q9UF83 564 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 KLK12Q9UKR0 248 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 DNAH8Q96JB1 4490 aa4.21□□□□□ -1.74
LRCH3-216ENST00000481048 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 LECT2O14960 151 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 SH2D1AO60880 128 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 S100A9P06702 114 aaKnown RBP4.2□□□□□ -1.74
LRCH3-216ENST00000481048 CXCL1P09341 107 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 RAB4BP61018 213 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 UBE2D3P61077 147 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 UBE2D2P62837 147 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 ZNF726P1Q15940 193 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 TMEM97Q5BJF2 176 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 FAM74A4Q5TZK3 123 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 RPL7L1Q6DKI1 246 aaKnown RBP4.2□□□□□ -1.74
LRCH3-216ENST00000481048 DGAT2L7PQ6IED9 249 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 SCXQ7RTU7 201 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 STOML3Q8TAV4 291 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 UBE2WQ96B02 151 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 ZC2HC1AQ96GY0 325 aa4.2□□□□□ -1.74
LRCH3-216ENST00000481048 A0A1B0GUV1 79 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 M0R036 132 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 M0R381 172 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 LTAP01374 205 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 UBE2G2P60604 165 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 Q5BKY6 102 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 PRR27Q6MZM9 219 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 BATF3Q9NR55 127 aa4.19□□□□□ -1.74
LRCH3-216ENST00000481048 FXYD6-FXYD2A0A087WZ82 144 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 GRIFINA4D1Z8 144 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 MAP1LC3B2A6NCE7 125 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 CRPP02741 224 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 KRTAP10-4P60372 401 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-216ENST00000481048 MIAQ16674 131 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 CST9LP1Q5W188 147 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 ENHOQ6UWT2 76 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 ZNF471Q9BX82 626 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-216ENST00000481048 MAP1LC3BQ9GZQ8 125 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 VAX2Q9UIW0 290 aa4.18□□□□□ -1.74
LRCH3-216ENST00000481048 UMAD1C9J7I0 102 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 SNAI2O43623 268 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 ANGP03950 147 aaKnown RBP4.17□□□□□ -1.74
LRCH3-216ENST00000481048 PRSS2P07478 247 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 OR5AL1P0C617 328 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 AKR1C3P42330 323 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 LINC01620Q4KN68 170 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 C9orf163Q8N9P6 203 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 NEXN-AS1Q8NBZ9 246 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 MBD3L1Q8WWY6 194 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 PRR34Q9NV39 138 aa4.17□□□□□ -1.74
LRCH3-216ENST00000481048 TRBV25-1A0A075B6N4 114 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 TMSB15BA0A087X1C1 80 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 PAGE4O60829 102 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 GZMBP10144 247 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 RPL19P84098 196 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms