RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CRIP3Q6Q6R5 217 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 SETD2Q9BYW2 2564 aaPredicted RBP4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 PLXNB1O43157 2135 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 KMT2BQ9UMN6 2715 aaPredicted RBP4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 SPART-AS1P0CW21 52 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 RPL35AP18077 110 aaKnown RBP4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 C5orf47Q569G3 176 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 DIRC1Q969H9 104 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 CLUHP3Q96NS8 147 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 PRO0255Q9UI72 69 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 SMIM9A6NGZ8 99 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 LYRM9A8MSI8 78 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 M0QXV9 152 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 TCL1BO95988 128 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 C5orf56Q8N8D9 126 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 ZNF22P17026 224 aaPredicted RBP4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 HIGD2BQ4VC39 106 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 PRSS33Q8NF86 280 aa4.7□□□□□ -1.66
PRPF4B-205ENST00000480058 TRAV12-2A0A075B6T6 113 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 HOXB4P17483 251 aaPredicted RBP4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 VWA8A3KMH1 1905 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 ODF3BA8MYP8 253 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 COL4A6Q14031 1691 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 TNFRSF13BO14836 293 aaPredicted RBP4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 LY6HO94772 140 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 LRRC75A-AS1Q8N1F1 130 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 PRAC2D3DTV9 90 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 K7EQG2 157 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 LST1O00453 97 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 PSCAO43653 123 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 FRMD6-AS1P0C7T7 363 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 GDF5OSQ5U4N7 250 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 CAMK2N2Q96S95 79 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 SIRPDQ9H106 197 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 C3orf22Q8N5N4 141 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 C10orf105Q8TEF2 133 aa4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 TMEM263Q8WUH6 116 aaKnown RBP4.69□□□□□ -1.66
PRPF4B-205ENST00000480058 IGHV3-16A0A0C4DH30 117 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 IGHV3-38A0A0C4DH36 116 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 PRR30Q53SZ7 412 aaPredicted RBP4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 TECTAO75443 2155 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 C5orf38Q86SI9 138 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 TMEM61Q8N0U2 210 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 Q6ZPA2 131 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 UBE2DNLQ8IWF7 75 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 IGF2RP11717 2491 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 IGKV2-29A2NJV5 120 aaPredicted RBP4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 UBE2D1P51668 147 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 LOXL1Q08397 574 aaPredicted RBP4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 LINC00322Q6ZN03 302 aaPredicted RBP4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 C2orf91Q6ZV80 131 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 ZFYVE26Q68DK2 2539 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 ZSWIM8A7E2V4 1837 aa4.68□□□□□ -1.66
PRPF4B-205ENST00000480058 NDUFC2-KCTD14E9PQ53 114 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 GNLYP22749 145 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 RPL39P62891 51 aaKnown RBP4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 ZFAND2AQ8N6M9 145 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 Q8N7P7 452 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 COX7CP15954 63 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 RUSC1-AS1Q66K80 236 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 LINC00308Q8TCZ7 52 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 C10orf142B7Z368 130 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 NDUFA7O95182 113 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 BRI3O95415 125 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 SPAG11BQ08648 103 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 THADAQ6YHU6 1953 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 CEP295Q9C0D2 2601 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 F8P00451 2351 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 THSD7BQ9C0I4 1608 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 MT-ATP8P03928 68 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 XCL1P47992 114 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 PTH2Q96A98 100 aa4.67□□□□□ -1.66
PRPF4B-205ENST00000480058 ZNF580Q9UK33 172 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 TNRC6AQ8NDV7 1962 aaKnown RBP4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 TRBV6-4A0A1B0GX49 114 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 A6NDX4 124 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 BPY2O14599 106 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 TRBV12-3P01733 135 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 PLXNA2O75051 1894 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 IGLV4-3A0A075B6K6 122 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 RPL18AQ02543 176 aaKnown RBP4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 DEFB112Q30KQ8 113 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 C9orf66Q5T8R8 295 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 IGKV3D-7A0A0C4DH55 119 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 CCL24O00175 119 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 COX7BP24311 80 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 PRORYQ9H606 182 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 Q6JHZ5 121 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 C20orf197Q8N268 126 aa4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 NOP10Q9NPE3 64 aaKnown RBP4.66□□□□□ -1.66
PRPF4B-205ENST00000480058 SMIM26A0A096LP01 95 aa4.65□□□□□ -1.66
PRPF4B-205ENST00000480058 RNF223E7ERA6 249 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms