RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	HHLA3	Q9XRX5	114 aa		10.7	□□□□□ -0.7
HDLBP-238	ENST00000479894		A0A087WWC5	75 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	EREG	O14944	169 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	APOC3	P02656	99 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	NTF3	P20783	257 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	S100P	P25815	95 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	SH2D6	Q7Z4S9	175 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	PRADC1	Q9BSG0	188 aa		10.69	□□□□□ -0.7
HDLBP-238	ENST00000479894	HMCN2	Q8NDA2	5059 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	TRBV6-4	A0A1B0GX49	114 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	PAX4	O43316	350 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	IGHV3-53	P01767	116 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	CLRN3	Q8NCR9	226 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	ZNF479	Q96JC4	524 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	BTF3L4	Q96K17	158 aa		10.68	□□□□□ -0.7
HDLBP-238	ENST00000479894	TRAV9-1	A0A075B6T8	112 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894		H7C1H1	209 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	SMR3B	P02814	79 aa	Predicted RBP	10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	RAB4B	P61018	213 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	FHL2	Q14192	279 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	RHOH	Q15669	191 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	FAM74A4	Q5TZK3	123 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894		Q6ZRN7	208 aa	Predicted RBP	10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	ATP5L2	Q7Z4Y8	100 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	NUP35	Q8NFH5	326 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	DPH3P1	Q9H4G8	78 aa		10.67	□□□□□ -0.7
HDLBP-238	ENST00000479894	TRAV26-1	A0A087WT03	109 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	MUC21	A0A0G2JKD1	596 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	MUC21	A0A140T8X8	626 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	C7orf77	A4D0Y5	90 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894		F5H697	171 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	GATA1	P15976	413 aa	Predicted RBP	10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	SST	P61278	116 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	SLC7A5P1	Q8MH63	180 aa		10.66	□□□□□ -0.7
HDLBP-238	ENST00000479894	TRBV10-1	A0A0K0K1A3	114 aa		10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	CRYGD	P07320	174 aa		10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	HOXA5	P20719	270 aa		10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	CRYBA4	P53673	196 aa		10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	KRTAP10-1	P60331	282 aa		10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	MRPL23	Q16540	153 aa	Known RBP	10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	C14orf178	Q8N769	122 aa	Predicted RBP	10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894	RPS10P5	Q9NQ39	176 aa		10.65	□□□□□ -0.7
HDLBP-238	ENST00000479894		A0A087WWL8	130 aa		10.64	□□□□□ -0.71
HDLBP-238	ENST00000479894	LINC00315	P59091	139 aa		10.64	□□□□□ -0.71
HDLBP-238	ENST00000479894	ZNF56	Q15929	161 aa		10.64	□□□□□ -0.71
HDLBP-238	ENST00000479894	UFSP1	Q6NVU6	142 aa		10.64	□□□□□ -0.71
HDLBP-238	ENST00000479894	ICOS	Q9Y6W8	199 aa		10.64	□□□□□ -0.71
HDLBP-238	ENST00000479894	HBB	P68871	147 aa		10.63	□□□□□ -0.71
HDLBP-238	ENST00000479894	RASL11A	Q6T310	242 aa		10.63	□□□□□ -0.71
HDLBP-238	ENST00000479894	TMEM191A	Q9H0A3	160 aa		10.63	□□□□□ -0.71
HDLBP-238	ENST00000479894	MRPS16	Q9Y3D3	137 aa	Known RBP	10.63	□□□□□ -0.71
HDLBP-238	ENST00000479894	IGHV3-73	A0A0B4J1V6	119 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894		K7EQD1	137 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	PPP1R17	O96001	155 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	EVI2A	P22794	236 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	COX19	Q49B96	90 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	SLC25A29	Q8N8R3	303 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	SAMD10	Q9BYL1	202 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	JPT2	Q9H910	190 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894	MSRB1	Q9NZV6	116 aa		10.62	□□□□□ -0.71
HDLBP-238	ENST00000479894		A0A0J9YY99	117 aa		10.61	□□□□□ -0.71
HDLBP-238	ENST00000479894	MGP	P08493	103 aa		10.61	□□□□□ -0.71
HDLBP-238	ENST00000479894	SRI	P30626	198 aa		10.61	□□□□□ -0.71
HDLBP-238	ENST00000479894	FUS	P35637	526 aa	Known RBP eCLIP	10.61	□□□□□ -0.71	2e-7	■■□□□ 14.1
HDLBP-238	ENST00000479894	KIF25-AS1	Q9Y6Z4	181 aa		10.61	□□□□□ -0.71
HDLBP-238	ENST00000479894	GYPE	P15421	78 aa		10.6	□□□□□ -0.71
HDLBP-238	ENST00000479894	RPL36A	P83881	106 aa	Known RBP	10.6	□□□□□ -0.71
HDLBP-238	ENST00000479894	NEGR1	Q7Z3B1	354 aa		10.6	□□□□□ -0.71
HDLBP-238	ENST00000479894	RPL36AL	Q969Q0	106 aa	Known RBP	10.6	□□□□□ -0.71
HDLBP-238	ENST00000479894	VSIG2	Q96IQ7	327 aa		10.6	□□□□□ -0.71
HDLBP-238	ENST00000479894	DNAJC30	Q96LL9	226 aa		10.6	□□□□□ -0.71
HDLBP-238	ENST00000479894	CAMP	P49913	170 aa		10.59	□□□□□ -0.71
HDLBP-238	ENST00000479894	ESRG	Q1W209	222 aa		10.59	□□□□□ -0.71
HDLBP-238	ENST00000479894	MRAP2	Q96G30	205 aa		10.59	□□□□□ -0.71
HDLBP-238	ENST00000479894	PLA2G2D	Q9UNK4	145 aa		10.59	□□□□□ -0.71
HDLBP-238	ENST00000479894	GCSH	P23434	173 aa		10.58	□□□□□ -0.72
HDLBP-238	ENST00000479894	MRPL54	Q6P161	138 aa	Known RBP	10.58	□□□□□ -0.72
HDLBP-238	ENST00000479894	TNFRSF18	Q9Y5U5	241 aa		10.58	□□□□□ -0.72
HDLBP-238	ENST00000479894	TRBV7-3	A0A075B6L6	115 aa		10.57	□□□□□ -0.72
HDLBP-238	ENST00000479894	PPBP	P02775	128 aa		10.57	□□□□□ -0.72
HDLBP-238	ENST00000479894	TMEM70	Q9BUB7	260 aa		10.57	□□□□□ -0.72
HDLBP-238	ENST00000479894		A0A087WTM6	91 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894		A0A1B0GXF2	115 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	TIRAP	P58753	221 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	TMEM97	Q5BJF2	176 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	FAM104B	Q5XKR9	115 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	SUMO4	Q6EEV6	95 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	GATD1	Q8NB37	220 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	NIT2	Q9NQR4	276 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894	SMCO4	Q9NRQ5	59 aa		10.56	□□□□□ -0.72
HDLBP-238	ENST00000479894		A0A096LPF7	62 aa		10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894		M0QY20	66 aa		10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894	S100A1	P23297	94 aa		10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894	DAZ4	Q86SG3	579 aa	Known RBP	10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894	NFE4	Q86UQ8	179 aa		10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894	ATP6V0E2	Q8NHE4	81 aa		10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894	DEFB104A	Q8WTQ1	72 aa		10.55	□□□□□ -0.72
HDLBP-238	ENST00000479894	DAZ3	Q9NR90	486 aa	Known RBP	10.55	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms