RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 LYRM9A8MSI8 78 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 PPP1R17O96001 155 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 ESDP10768 282 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 S100A2P29034 98 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
APTX-223ENST00000479656 FA2HQ7L5A8 372 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 FAM19A2Q8N3H0 131 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 LINC00612Q8N6U2 182 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 Q9UF83 564 aa7.97□□□□□ -1.13
APTX-223ENST00000479656 HSBP1O75506 76 aa7.96□□□□□ -1.13
APTX-223ENST00000479656 CHCHD1Q96BP2 118 aaKnown RBP7.96□□□□□ -1.13
APTX-223ENST00000479656 C20orf78Q9BR46 151 aa7.96□□□□□ -1.13
APTX-223ENST00000479656 ST20Q9HBF5 79 aa7.96□□□□□ -1.13
APTX-223ENST00000479656 NIT2Q9NQR4 276 aa7.96□□□□□ -1.13
APTX-223ENST00000479656 CELA1Q9UNI1 258 aa7.96□□□□□ -1.13
APTX-223ENST00000479656 IGLV2-18A0A075B6J9 118 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 H7C1H1 209 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 FABP4P15090 132 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 PMCHP20382 165 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 PMCHL1Q16048 86 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 Q8N8P6 123 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.14
APTX-223ENST00000479656 NOTCH1P46531 2555 aa7.95□□□□□ -1.14
APTX-223ENST00000479656 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
APTX-223ENST00000479656 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
APTX-223ENST00000479656 DEFB104AQ8WTQ1 72 aa7.95□□□□□ -1.14
APTX-223ENST00000479656 EDA2RQ9HAV5 297 aa7.95□□□□□ -1.14
APTX-223ENST00000479656 NXT2Q9NPJ8 142 aaKnown RBP7.95□□□□□ -1.14
APTX-223ENST00000479656 AP5S1Q9NUS5 200 aa7.95□□□□□ -1.14
APTX-223ENST00000479656 TRGV4A0A0C4DH28 118 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 TRBV6-5A0A0K0K1A5 114 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 SDHAF1A6NFY7 115 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 CIDEAO60543 219 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 AMTP48728 403 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 POLR2KP53803 58 aaKnown RBP7.94□□□□□ -1.14
APTX-223ENST00000479656 FHL2Q14192 279 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 TMEM18Q96B42 140 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 C18orf15Q96N68 181 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 SMIM2Q9BVW6 85 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 MGAM2Q2M2H8 2515 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 DNHD1Q96M86 4753 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 TCAPO15273 167 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 SMIM6P0DI80 62 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 DAD1P61803 113 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 SLC25A29Q8N8R3 303 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 NEXN-AS1Q8NBZ9 246 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 SPATA25Q9BR10 227 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 TM2D3Q9BRN9 247 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 TMEM70Q9BUB7 260 aa7.94□□□□□ -1.14
APTX-223ENST00000479656 IGHV1-24A0A0C4DH33 117 aa7.93□□□□□ -1.14
APTX-223ENST00000479656 AKR1D1P51857 326 aa7.93□□□□□ -1.14
APTX-223ENST00000479656 TNFRSF18Q9Y5U5 241 aa7.93□□□□□ -1.14
APTX-223ENST00000479656 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 K7EQD1 137 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 VCYO14598 125 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 OR10D4PQ8NGN7 298 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 NBEAL1Q6ZS30 2694 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 A0A0J9YWU9 116 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 RPL32P62910 135 aaKnown RBP7.92□□□□□ -1.14
APTX-223ENST00000479656 ZNRF2Q8NHG8 242 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 DNAJC30Q96LL9 226 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 PACRGQ96M98 296 aaPredicted RBP7.92□□□□□ -1.14
APTX-223ENST00000479656 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
APTX-223ENST00000479656 TRBV27A0A0K0K1C4 114 aa7.91□□□□□ -1.14
APTX-223ENST00000479656 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
APTX-223ENST00000479656 LAGE3Q14657 143 aa7.91□□□□□ -1.14
APTX-223ENST00000479656 C11orf68Q9H3H3 251 aaKnown RBP7.91□□□□□ -1.14
APTX-223ENST00000479656 CBY1Q9Y3M2 126 aa7.91□□□□□ -1.14
APTX-223ENST00000479656 A0A096LNJ9 63 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 LOC100131303A0A0U1RQF7 123 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 GAGE12JA6NER3 117 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 GAGE1Q13065 139 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 GAGE4Q13068 117 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 GAGE5Q13069 117 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 C12orf74Q32Q52 190 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 GAGE13Q4V321 117 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 KIR2DL4Q99706 377 aa7.9□□□□□ -1.14
APTX-223ENST00000479656 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 TRBV10-1A0A0K0K1A3 114 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 TEX48A0A1B0GUV7 120 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 I3L3M4 83 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 ATP5G1P05496 136 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 RPL36AP83881 106 aaKnown RBP7.89□□□□□ -1.15
APTX-223ENST00000479656 PHLDA1Q8WV24 401 aaPredicted RBP7.89□□□□□ -1.15
APTX-223ENST00000479656 RPL36ALQ969Q0 106 aaKnown RBP7.89□□□□□ -1.15
APTX-223ENST00000479656 ZMAT4Q9H898 229 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 HBDP02042 147 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 HTN3P15516 51 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 FCER1GP30273 86 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 CRYBA4P53673 196 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 RHOHQ15669 191 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 PRO0255Q9UI72 69 aa7.89□□□□□ -1.15
APTX-223ENST00000479656 K7EMI3 77 aa7.88□□□□□ -1.15
APTX-223ENST00000479656 NUDT3O95989 172 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms