RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
ATG4B-218ENST00000479554 HIST1H2BNQ99877 126 aa9.81□□□□□ -0.84
ATG4B-218ENST00000479554 HIST1H2BMQ99879 126 aa9.81□□□□□ -0.84
ATG4B-218ENST00000479554 MRPL18Q9H0U6 180 aaKnown RBP9.81□□□□□ -0.84
ATG4B-218ENST00000479554 TRAV4A0A0B4J268 109 aa9.8□□□□□ -0.84
ATG4B-218ENST00000479554 A0A1B0GUT8 65 aa9.8□□□□□ -0.84
ATG4B-218ENST00000479554 K7EQD1 137 aa9.8□□□□□ -0.84
ATG4B-218ENST00000479554 S100A8P05109 93 aa9.8□□□□□ -0.84
ATG4B-218ENST00000479554 RAB4BP61018 213 aa9.8□□□□□ -0.84
ATG4B-218ENST00000479554 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
ATG4B-218ENST00000479554 IGHV3-16A0A0C4DH30 117 aa9.79□□□□□ -0.84
ATG4B-218ENST00000479554 M0R2P5 195 aa9.79□□□□□ -0.84
ATG4B-218ENST00000479554 GYPEP15421 78 aa9.79□□□□□ -0.84
ATG4B-218ENST00000479554 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
ATG4B-218ENST00000479554 Q6ZRN7 208 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-218ENST00000479554 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
ATG4B-218ENST00000479554 IGKV3D-20A0A0C4DH25 116 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 C5orf52A6NGY3 159 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 GNRH2O43555 120 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 IGLC6P0CF74 106 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 CTRLP40313 264 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 CAMPP49913 170 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 NDUFA6P56556 154 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 LYZL1Q6UWQ5 148 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 FER1L6-AS1Q8NA97 138 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 OR4C5Q8NGB2 326 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 KCNS1Q96KK3 526 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 C11orf21Q9P2W6 132 aa9.78□□□□□ -0.84
ATG4B-218ENST00000479554 TRAV9-2A0A087WT02 112 aa9.77□□□□□ -0.85
ATG4B-218ENST00000479554 F2Z2F3 143 aa9.77□□□□□ -0.85
ATG4B-218ENST00000479554 APCSP02743 223 aa9.77□□□□□ -0.85
ATG4B-218ENST00000479554 ARMS2P0C7Q2 107 aa9.77□□□□□ -0.85
ATG4B-218ENST00000479554 SNRPEP62304 92 aaKnown RBP9.77□□□□□ -0.85
ATG4B-218ENST00000479554 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
ATG4B-218ENST00000479554 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
ATG4B-218ENST00000479554 EREGO14944 169 aa9.76□□□□□ -0.85
ATG4B-218ENST00000479554 NFE4Q86UQ8 179 aa9.76□□□□□ -0.85
ATG4B-218ENST00000479554 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
ATG4B-218ENST00000479554 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
ATG4B-218ENST00000479554 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
ATG4B-218ENST00000479554 EVI2AP22794 236 aa9.74□□□□□ -0.85
ATG4B-218ENST00000479554 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
ATG4B-218ENST00000479554 LOC100131303A0A0U1RQF7 123 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 K7EP13 123 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 OR5AL1P0C617 328 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 GATA1P15976 413 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-218ENST00000479554 CACNG7P62955 275 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 SSBP4Q9BWG4 385 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-218ENST00000479554 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
ATG4B-218ENST00000479554 SNAI2O43623 268 aa9.72□□□□□ -0.85
ATG4B-218ENST00000479554 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
ATG4B-218ENST00000479554 ASIPP42127 132 aa9.72□□□□□ -0.85
ATG4B-218ENST00000479554 TWIST1Q15672 202 aa9.72□□□□□ -0.85
ATG4B-218ENST00000479554 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
ATG4B-218ENST00000479554 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
ATG4B-218ENST00000479554 CRYGDP07320 174 aa9.71□□□□□ -0.86
ATG4B-218ENST00000479554 S100A4P26447 101 aaKnown RBP9.71□□□□□ -0.86
ATG4B-218ENST00000479554 Q0VG73 95 aa9.71□□□□□ -0.86
ATG4B-218ENST00000479554 Q8N1X5 172 aa9.71□□□□□ -0.86
ATG4B-218ENST00000479554 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
ATG4B-218ENST00000479554 H3BVH4 76 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 RS1O15537 224 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 CIDEAO60543 219 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 NTF3P20783 257 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATG4B-218ENST00000479554 TIRAPP58753 221 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 RHOHQ15669 191 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 CFAP126Q5VTH2 177 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 SCRT2Q9NQ03 307 aa9.7□□□□□ -0.86
ATG4B-218ENST00000479554 A0A087WTM6 91 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 MUC21A0A0G2JKD1 596 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 MUC21A0A140T8X8 626 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 SSTP61278 116 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 FAM104BQ5XKR9 115 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 SMIM15Q7Z3B0 74 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 BAGE3Q86Y29 109 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 HIST3H2BBQ8N257 126 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 ALKBH7Q9BT30 221 aaPredicted RBP9.69□□□□□ -0.86
ATG4B-218ENST00000479554 TMEM191AQ9H0A3 160 aa9.69□□□□□ -0.86
ATG4B-218ENST00000479554 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 RNASE3P12724 160 aaKnown RBP9.68□□□□□ -0.86
ATG4B-218ENST00000479554 S100A2P29034 98 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 SPANXN1Q5VSR9 72 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 OR10AG1Q8NH19 301 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 PTH2Q96A98 100 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 PHLDA3Q9Y5J5 127 aa9.68□□□□□ -0.86
ATG4B-218ENST00000479554 TRAV8-6A0A0B4J262 113 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms