RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
HDAC7-221ENST00000477203 ANK3Q12955 4377 aaKnown RBP9.98□□□□□ -0.81
HDAC7-221ENST00000477203 TRBV7-9A0A0J9YWB2 115 aa9.98□□□□□ -0.81
HDAC7-221ENST00000477203 F5H697 171 aa9.98□□□□□ -0.81
HDAC7-221ENST00000477203 TSPAN13O95857 204 aa9.98□□□□□ -0.81
HDAC7-221ENST00000477203 LEPP41159 167 aa9.98□□□□□ -0.81
HDAC7-221ENST00000477203 MDFICQ9P1T7 246 aa9.98□□□□□ -0.81
HDAC7-221ENST00000477203 F8P00451 2351 aa9.97□□□□□ -0.81
HDAC7-221ENST00000477203 LINC01619G3V211 115 aa9.97□□□□□ -0.81
HDAC7-221ENST00000477203 K7EQG2 157 aa9.97□□□□□ -0.81
HDAC7-221ENST00000477203 FHL3Q13643 280 aa9.97□□□□□ -0.81
HDAC7-221ENST00000477203 CITED2Q99967 270 aaPredicted RBP9.97□□□□□ -0.81
HDAC7-221ENST00000477203 SIVA1O15304 175 aa9.96□□□□□ -0.81
HDAC7-221ENST00000477203 KRTAP1-1Q07627 177 aa9.96□□□□□ -0.81
HDAC7-221ENST00000477203 IFI27L1Q96BM0 104 aa9.96□□□□□ -0.81
HDAC7-221ENST00000477203 PRSS1P07477 247 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 RNASE3P12724 160 aaKnown RBP9.96□□□□□ -0.82
HDAC7-221ENST00000477203 C3orf56Q8N813 242 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 IGHV3OR16-12A0A075B7B8 117 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 Q6ZUT4 128 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 ZNF580Q9UK33 172 aa9.96□□□□□ -0.82
HDAC7-221ENST00000477203 IGHV3-73A0A0B4J1V6 119 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 A0A0J9YX75 114 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 GAGE5Q13069 117 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 GAGE6Q13070 117 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 TRBV25-1A0A075B6N4 114 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 LOC107984156A0A0G2JMH3 177 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 FOXI1Q12951 378 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 ARL17AQ8IVW1 177 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 TMEM158Q8WZ71 300 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 HIST1H4GQ99525 98 aa9.95□□□□□ -0.82
HDAC7-221ENST00000477203 NFE4Q86UQ8 179 aa9.94□□□□□ -0.82
HDAC7-221ENST00000477203 U3KQK5 164 aa9.94□□□□□ -0.82
HDAC7-221ENST00000477203 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
HDAC7-221ENST00000477203 KIR2DL4Q99706 377 aa9.94□□□□□ -0.82
HDAC7-221ENST00000477203 E9PLD3 99 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 HBDP02042 147 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 LGALS9BQ3B8N2 356 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 LGALS9CQ6DKI2 356 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 Q8N1Y9 231 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 PHLDA1Q8WV24 401 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-221ENST00000477203 RAX2Q96IS3 184 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 CNFNQ9BYD5 112 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 TMEM160Q9NX00 188 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 CEND1Q8N111 149 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 OR11H2Q8NH07 326 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 PSMB2P49721 201 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 LENEPQ9Y5L5 61 aa9.93□□□□□ -0.82
HDAC7-221ENST00000477203 TM2D2Q9BX73 214 aa9.92□□□□□ -0.82
HDAC7-221ENST00000477203 TMEM89A2RUT3 159 aa9.92□□□□□ -0.82
HDAC7-221ENST00000477203 KLLNB2CW77 178 aa9.92□□□□□ -0.82
HDAC7-221ENST00000477203 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
HDAC7-221ENST00000477203 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
HDAC7-221ENST00000477203 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 NRACQ8N912 160 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 LINC01006Q8NI28 216 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 CCDC179H3BU77 68 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 RBMY1A1P0DJD3 496 aaKnown RBP9.91□□□□□ -0.82
HDAC7-221ENST00000477203 RBMY1CP0DJD4 496 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 RBMY1FQ15415 496 aaKnown RBP9.91□□□□□ -0.82
HDAC7-221ENST00000477203 TEX29Q8N6K0 151 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 C4orf3Q8WVX3 66 aa9.91□□□□□ -0.82
HDAC7-221ENST00000477203 CCL24O00175 119 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 FOXC2Q99958 501 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 XCL2Q9UBD3 114 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 LGALS9O00182 355 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 ZFAND6Q6FIF0 208 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 Q8N2B8 174 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 MAPKAPK5-AS1Q8N8E1 139 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 WFDC10AQ9H1F0 79 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 PEMTQ9UBM1 199 aa9.9□□□□□ -0.82
HDAC7-221ENST00000477203 RASL10AQ92737 203 aa9.89□□□□□ -0.83
HDAC7-221ENST00000477203 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
HDAC7-221ENST00000477203 RBMY1BA6NDE4 496 aaKnown RBP9.89□□□□□ -0.83
HDAC7-221ENST00000477203 RBMY1EA6NEQ0 496 aaKnown RBP9.89□□□□□ -0.83
HDAC7-221ENST00000477203 RBMY1DP0C7P1 496 aaKnown RBP9.89□□□□□ -0.83
HDAC7-221ENST00000477203 ZNF56Q15929 161 aa9.89□□□□□ -0.83
HDAC7-221ENST00000477203 ZNF256Q9Y2P7 627 aaPredicted RBP9.89□□□□□ -0.83
HDAC7-221ENST00000477203 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
HDAC7-221ENST00000477203 RNF152Q8N8N0 203 aa9.88□□□□□ -0.83
HDAC7-221ENST00000477203 DEFB114Q30KQ6 69 aa9.88□□□□□ -0.83
HDAC7-221ENST00000477203 ZNF876PQ49A33 203 aa9.88□□□□□ -0.83
HDAC7-221ENST00000477203 ZFP2Q6ZN57 461 aa9.88□□□□□ -0.83
HDAC7-221ENST00000477203 IGHV1OR15-1A0A075B7D0 117 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 LY6G6DO95868 133 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
HDAC7-221ENST00000477203 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 CITED1Q99966 193 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 NXT2Q9NPJ8 142 aaKnown RBP9.87□□□□□ -0.83
HDAC7-221ENST00000477203 INAFM1C9JVW0 142 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 PROK1P58294 105 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 TRRAPQ9Y4A5 3859 aa9.87□□□□□ -0.83
HDAC7-221ENST00000477203 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms