RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PDE6DO43924 150 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 ASIPP42127 132 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 CRYBA4P53673 196 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 ZNF876PQ49A33 203 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 IGHV3-73A0A0B4J1V6 119 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 A0A1B0GV72 72 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 PAX4O43316 350 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 ARMS2P0C7Q2 107 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
HDAC3-208ENST00000476739 ESRGQ1W209 222 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 RNF151Q2KHN1 245 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 CFAP126Q5VTH2 177 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 JPT2Q9H910 190 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 IL36BQ9NZH7 164 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 HHLA3Q9XRX5 114 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 LINC00588Q9Y4M8 146 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
HDAC3-208ENST00000476739 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 H3BNG1 76 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 RS1O15537 224 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 MGST1P10620 155 aaKnown RBP6.71□□□□□ -1.34
HDAC3-208ENST00000476739 GNG4P50150 75 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 Q0VG73 95 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 BATFQ16520 125 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 PTH2Q96A98 100 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 CST9LQ9H4G1 147 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 SCRT2Q9NQ03 307 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
HDAC3-208ENST00000476739 C19orf71A6NCJ1 209 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 M0R2N4 97 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 Q6ZSN1 163 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 NIT1Q86X76 327 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 SMIM7Q9BQ49 75 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 SAMD10Q9BYL1 202 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 PARLQ9H300 379 aa6.7□□□□□ -1.34
HDAC3-208ENST00000476739 MUC21A0A0G2JKD1 596 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 MUC21A0A140T8X8 626 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 K7EN84 100 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 K7EQD1 137 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 SMIM17P0DL12 118 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 GYPEP15421 78 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 GATA1P15976 413 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-208ENST00000476739 CCL18P55774 89 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 VAMP3Q15836 100 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 Q6ZN92 141 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 ZNRF2Q8NHG8 242 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 OCC1Q8TAD7 63 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 ICOSQ9Y6W8 199 aa6.69□□□□□ -1.34
HDAC3-208ENST00000476739 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
HDAC3-208ENST00000476739 M0R381 172 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 MT-ND6P03923 174 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 CTRLP40313 264 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 SLAQ13239 276 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 ADIRFQ15847 76 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 GTF2H5Q6ZYL4 71 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 OR10AG1Q8NH19 301 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 Q9UF83 564 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 PHLDA3Q9Y5J5 127 aa6.68□□□□□ -1.34
HDAC3-208ENST00000476739 A0A087WWL8 130 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 A8MWV9 139 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 SNAI2O43623 268 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 CRYGDP07320 174 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 MED14OSP0DP75 135 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 MRPL23Q16540 153 aaKnown RBP6.67□□□□□ -1.34
HDAC3-208ENST00000476739 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 OR10J3Q5JRS4 329 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 PIK3CD-AS1Q5SR53 167 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 MRPL54Q6P161 138 aaKnown RBP6.67□□□□□ -1.34
HDAC3-208ENST00000476739 WDR73Q6P4I2 378 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 LYPD5Q6UWN5 251 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 Q6ZR54 194 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 SFRP2Q96HF1 295 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 SSBP4Q9BWG4 385 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-208ENST00000476739 RNASE7Q9H1E1 156 aaKnown RBP6.67□□□□□ -1.34
HDAC3-208ENST00000476739 PAM16Q9Y3D7 125 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
HDAC3-208ENST00000476739 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 NXPH4O95158 308 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 IGLC6P0CF74 106 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 RPL23P62829 140 aaKnown RBP6.66□□□□□ -1.34
HDAC3-208ENST00000476739 FAM74A4Q5TZK3 123 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 NEGR1Q7Z3B1 354 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 C14orf178Q8N769 122 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-208ENST00000476739 STPG4Q8N801 248 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 SYT8Q8NBV8 401 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 DAZAP1Q96EP5 407 aaKnown RBP6.66□□□□□ -1.34
HDAC3-208ENST00000476739 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 Q9H8V8 135 aa6.66□□□□□ -1.34
HDAC3-208ENST00000476739 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
HDAC3-208ENST00000476739 J3QR89 54 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms