RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 UNQ9165/PRO28630Q6UXU0 137 aa13.57□□□□□ -0.24
LPCAT1-202ENST00000475622 PTH2Q96A98 100 aa13.57□□□□□ -0.24
LPCAT1-202ENST00000475622 C19orf71A6NCJ1 209 aa13.56□□□□□ -0.24
LPCAT1-202ENST00000475622 CRYGBP07316 175 aa13.56□□□□□ -0.24
LPCAT1-202ENST00000475622 HIGD2BQ4VC39 106 aa13.56□□□□□ -0.24
LPCAT1-202ENST00000475622 TRBV6-1A0A0K0K1D8 114 aa13.56□□□□□ -0.24
LPCAT1-202ENST00000475622 TRBV12-3P01733 135 aa13.55□□□□□ -0.24
LPCAT1-202ENST00000475622 NOTCH4Q99466 2003 aa13.55□□□□□ -0.24
LPCAT1-202ENST00000475622 J3KT08 172 aa13.55□□□□□ -0.24
LPCAT1-202ENST00000475622 CEMP1Q6PRD7 247 aaPredicted RBP13.55□□□□□ -0.24
LPCAT1-202ENST00000475622 FANCD2OSQ96PS1 177 aa13.54□□□□□ -0.24
LPCAT1-202ENST00000475622 A0A0J9YX75 114 aa13.54□□□□□ -0.24
LPCAT1-202ENST00000475622 NDUFC2O95298 119 aa13.53□□□□□ -0.24
LPCAT1-202ENST00000475622 LOXL1Q08397 574 aaPredicted RBP13.53□□□□□ -0.24
LPCAT1-202ENST00000475622 NCKAP5O14513 1909 aa13.53□□□□□ -0.24
LPCAT1-202ENST00000475622 SONP18583 2426 aaKnown RBP13.53□□□□□ -0.24
LPCAT1-202ENST00000475622 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
LPCAT1-202ENST00000475622 TMEM256-PLSCR3K7ERE1 68 aa13.52□□□□□ -0.24
LPCAT1-202ENST00000475622 ANAPC1Q9H1A4 1944 aa13.52□□□□□ -0.25
LPCAT1-202ENST00000475622 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
LPCAT1-202ENST00000475622 MYCNOSP40205 109 aa13.52□□□□□ -0.25
LPCAT1-202ENST00000475622 NFE4Q86UQ8 179 aa13.52□□□□□ -0.25
LPCAT1-202ENST00000475622 Q6ZUT4 128 aa13.52□□□□□ -0.25
LPCAT1-202ENST00000475622 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 G3V4G9 280 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 MSMPQ1L6U9 139 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 SIRPDQ9H106 197 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 TMEM263Q8WUH6 116 aaKnown RBP13.51□□□□□ -0.25
LPCAT1-202ENST00000475622 PROP1O75360 226 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 TM2D2Q9BX73 214 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 C11orf1Q9H5F2 150 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 ZNF80P51504 273 aaPredicted RBP13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 FRMPD3Q5JV73 1810 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 DSCAML1Q8TD84 2053 aa13.5□□□□□ -0.25
LPCAT1-202ENST00000475622 TTC28Q96AY4 2481 aa13.49□□□□□ -0.25
LPCAT1-202ENST00000475622 MUC6Q6W4X9 2439 aa13.49□□□□□ -0.25
LPCAT1-202ENST00000475622 DAZAP2Q15038 168 aaPredicted RBP13.49□□□□□ -0.25
LPCAT1-202ENST00000475622 SPATA12Q7Z6I5 190 aa13.49□□□□□ -0.25
LPCAT1-202ENST00000475622 TNRC6AQ8NDV7 1962 aaKnown RBP13.49□□□□□ -0.25
LPCAT1-202ENST00000475622 MIAQ16674 131 aa13.49□□□□□ -0.25
LPCAT1-202ENST00000475622 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 TCL1BO95988 128 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 SORL1Q92673 2214 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 A0A1B0GXF2 115 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 TRBV10-1A0A0K0K1A3 114 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 WFDC11Q8NEX6 87 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 ARHGAP21Q5T5U3 1957 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 LINC00322Q6ZN03 302 aaPredicted RBP13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 SPATA25Q9BR10 227 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 CACNA1AO00555 2505 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 P0DMU3 169 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 FAM231AP0DMU4 169 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 FAM231CP0DMU5 169 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 COX7BP24311 80 aa13.48□□□□□ -0.25
LPCAT1-202ENST00000475622 FREM1Q5H8C1 2179 aa13.47□□□□□ -0.25
LPCAT1-202ENST00000475622 H0Y9J4 135 aa13.47□□□□□ -0.25
LPCAT1-202ENST00000475622 C4orf48Q5BLP8 95 aa13.47□□□□□ -0.25
LPCAT1-202ENST00000475622 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.25
LPCAT1-202ENST00000475622 PLA2G5P39877 138 aa13.46□□□□□ -0.25
LPCAT1-202ENST00000475622 WISP2O76076 250 aa13.46□□□□□ -0.25
LPCAT1-202ENST00000475622 LINC00643Q86TS7 51 aa13.46□□□□□ -0.25
LPCAT1-202ENST00000475622 HIVEP2P31629 2446 aa13.46□□□□□ -0.25
LPCAT1-202ENST00000475622 A6NDX4 124 aa13.46□□□□□ -0.26
LPCAT1-202ENST00000475622 PDE6GP18545 87 aa13.46□□□□□ -0.26
LPCAT1-202ENST00000475622 CCDC140Q96MF4 163 aa13.46□□□□□ -0.26
LPCAT1-202ENST00000475622 A0A0J9YXY3 114 aa13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 TP53TG3Q9ULZ0 132 aa13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 IGLV2-8P01709 118 aa13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 SMAD5-AS1Q9Y6J3 95 aa13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 P0C879 139 aa13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 MGAMO43451 1857 aa13.45□□□□□ -0.26
LPCAT1-202ENST00000475622 FAM110AQ9BQ89 295 aa13.44□□□□□ -0.26
LPCAT1-202ENST00000475622 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
LPCAT1-202ENST00000475622 TRAV23DV6A0A075B6W5 121 aa13.43□□□□□ -0.26
LPCAT1-202ENST00000475622 GDF5OSQ5U4N7 250 aa13.43□□□□□ -0.26
LPCAT1-202ENST00000475622 HIST2H2BDQ6DRA6 164 aa13.43□□□□□ -0.26
LPCAT1-202ENST00000475622 DENND4CQ5VZ89 1909 aa13.43□□□□□ -0.26
LPCAT1-202ENST00000475622 Q6ZTI0 123 aa13.43□□□□□ -0.26
LPCAT1-202ENST00000475622 LINC01548A6NM66 108 aa13.42□□□□□ -0.26
LPCAT1-202ENST00000475622 ZFAND2AQ8N6M9 145 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 RNF183Q96D59 192 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 IGKV2-24A0A0C4DH68 120 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 UPK3BQ9BT76 320 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 SPRY4Q9C004 299 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 BPY2O14599 106 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 LINC00269Q8N2A0 174 aa13.41□□□□□ -0.26
LPCAT1-202ENST00000475622 UFSP1Q6NVU6 142 aa13.4□□□□□ -0.26
LPCAT1-202ENST00000475622 BRWD1-AS2P59051 145 aa13.4□□□□□ -0.26
LPCAT1-202ENST00000475622 TNRC6BQ9UPQ9 1833 aaKnown RBP13.39□□□□□ -0.27
LPCAT1-202ENST00000475622 HIGD2AQ9BW72 106 aa13.39□□□□□ -0.27
LPCAT1-202ENST00000475622 MYO18BQ8IUG5 2567 aa13.39□□□□□ -0.27
LPCAT1-202ENST00000475622 SVIPQ8NHG7 77 aa13.39□□□□□ -0.27
LPCAT1-202ENST00000475622 INSL3P51460 131 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms