RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF415Q09FC8 603 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 RHOHQ15669 191 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 SPINK13Q1W4C9 94 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 ZC2HC1BQ5TFG8 222 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 FAM74A4Q5TZK3 123 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 RASL10AQ92737 203 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 A8MWV9 139 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 H3BRM9 83 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 RHODO00212 210 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 INSP01308 110 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 NPSP0C0P6 89 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 NHLRC4P0CG21 123 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 SMIM13P0DJ93 91 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 FGF6P10767 208 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 DEFB131AP59861 70 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 DEFB1P60022 68 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 GTSCR1Q86UQ5 136 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 KLHL30-AS1Q8NEE0 82 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 DUX3Q96PT4 197 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 TIMM17AQ99595 171 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 SPAG8Q99932 426 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 MRPL35Q9NZE8 188 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 MED13LQ71F56 2210 aa4.35□□□□□ -1.71
ATPAF1-204ENST00000474020 AKAP6Q13023 2319 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 TRAV12-2A0A075B6T6 113 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 A0A087WWL8 130 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 TRAV8-6A0A0B4J262 113 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 SDHAF1A6NFY7 115 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 I3L3M4 83 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 M0R2P5 195 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 GAS8-AS1O95177 125 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 FABP2P12104 132 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 TCTAP57738 103 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 SMAGPQ0VAQ4 97 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 PMVKQ15126 192 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 ZNF876PQ49A33 203 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 PIK3CD-AS1Q5SR53 167 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 C10orf99Q6UWK7 81 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 ZFP2Q6ZN57 461 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 C2orf91Q6ZV80 131 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 ZNF418Q8TF45 676 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 SPXQ9BT56 116 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
ATPAF1-204ENST00000474020 ABCA2Q9BZC7 2435 aa4.34□□□□□ -1.72
ATPAF1-204ENST00000474020 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 MYMXA0A1B0GTQ4 84 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 GAGE10A6NGK3 116 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 KNCNA6PVL3 124 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 TAX1BP3O14907 124 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 KRTAP10-9P60411 292 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 NSUN5P1Q3KNT7 163 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 SCGB1D4Q6XE38 83 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 Q6ZQT7 251 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 Q8N9P0 234 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 OR5A1Q8NGJ0 315 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 BAALCQ8WXS3 180 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 PTH2Q96A98 100 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 LINC01587Q99440 93 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 HIST1H4GQ99525 98 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 LINC00467Q9BRT7 94 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 ZNF256Q9Y2P7 627 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 CBY1Q9Y3M2 126 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 CELSR1Q9NYQ6 3014 aa4.33□□□□□ -1.72
ATPAF1-204ENST00000474020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.33□□□□□ -1.725e-6■■■■□ 22.8
ATPAF1-204ENST00000474020 F8P00451 2351 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 TRBV25-1A0A075B6N4 114 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 E9PLD3 99 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 H3BMM0 161 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 HTN1P15515 57 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 LGALS3P17931 250 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 EDN2P20800 178 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 POLR2KP53803 58 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 DEFB136Q30KP8 78 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 LYRM7Q5U5X0 104 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 ADAMTSL5Q6ZMM2 481 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 STHQ8IWL8 128 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 TMEM61Q8N0U2 210 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 CEND1Q8N111 149 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 MAP6D1Q9H9H5 199 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 EDA2RQ9HAV5 297 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 HHLA3Q9XRX5 114 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 TSSC4Q9Y5U2 329 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 KIF25-AS1Q9Y6Z4 181 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 OTOGQ6ZRI0 2925 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
ATPAF1-204ENST00000474020 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
ATPAF1-204ENST00000474020 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
ATPAF1-204ENST00000474020 A8MTW9 85 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms