RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 GNB1LQ9BYB4 327 aa9.04□□□□□ -0.96
TPM3-216ENST00000473036 TMEM191AQ9H0A3 160 aa9.04□□□□□ -0.96
TPM3-216ENST00000473036 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
TPM3-216ENST00000473036 K7EQD1 137 aa9.03□□□□□ -0.96
TPM3-216ENST00000473036 SLC25A29Q8N8R3 303 aa9.03□□□□□ -0.96
TPM3-216ENST00000473036 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
TPM3-216ENST00000473036 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 A0A1B0GXF2 115 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 M0R2N4 97 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 PPP1R17O96001 155 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 HLA-DQA1P01909 254 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 CRYGDP07320 174 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 GYPEP15421 78 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 CAMPP49913 170 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
TPM3-216ENST00000473036 UBE2DNLQ8IWF7 75 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
TPM3-216ENST00000473036 H7C1H1 209 aa9.01□□□□□ -0.97
TPM3-216ENST00000473036 PPBPP02775 128 aa9.01□□□□□ -0.97
TPM3-216ENST00000473036 RAB4BP61018 213 aa9.01□□□□□ -0.97
TPM3-216ENST00000473036 Q6ZR54 194 aa9.01□□□□□ -0.97
TPM3-216ENST00000473036 CBLN2Q8IUK8 224 aa9.01□□□□□ -0.97
TPM3-216ENST00000473036 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
TPM3-216ENST00000473036 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
TPM3-216ENST00000473036 A0A087WWL8 130 aa9□□□□□ -0.97
TPM3-216ENST00000473036 SSTP61278 116 aa9□□□□□ -0.97
TPM3-216ENST00000473036 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
TPM3-216ENST00000473036 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
TPM3-216ENST00000473036 ICOSQ9Y6W8 199 aa9□□□□□ -0.97
TPM3-216ENST00000473036 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
TPM3-216ENST00000473036 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 LINC00694P0DN24 101 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 CCL18P55774 89 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 FAM104BQ5XKR9 115 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 MRAP2Q96G30 205 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 MSRB1Q9NZV6 116 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 KIF25-AS1Q9Y6Z4 181 aa8.99□□□□□ -0.97
TPM3-216ENST00000473036 ABCA13Q86UQ4 5058 aa8.98□□□□□ -0.97
TPM3-216ENST00000473036 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
TPM3-216ENST00000473036 F5H697 171 aa8.98□□□□□ -0.97
TPM3-216ENST00000473036 EVI2AP22794 236 aa8.98□□□□□ -0.97
TPM3-216ENST00000473036 LINC00315P59091 139 aa8.98□□□□□ -0.97
TPM3-216ENST00000473036 MRPL23Q16540 153 aaKnown RBP8.98□□□□□ -0.97
TPM3-216ENST00000473036 MRPS16Q9Y3D3 137 aaKnown RBP8.98□□□□□ -0.97
TPM3-216ENST00000473036 TRBV10-1A0A0K0K1A3 114 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 COLCA2A8K830 154 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 APCSP02743 223 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 RAB5AP20339 215 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.97□□□□□ -0.97
TPM3-216ENST00000473036 LAMTOR2Q9Y2Q5 125 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 TRAPPC1Q9Y5R8 145 aa8.97□□□□□ -0.97
TPM3-216ENST00000473036 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 RTL8CO15255 209 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 RAB4AP20338 218 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 SRIP30626 198 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 CKS2P33552 79 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 RHOHQ15669 191 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 ZNF56Q15929 161 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 NEGR1Q7Z3B1 354 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 SH2D6Q7Z4S9 175 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 DNAJC30Q96LL9 226 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 Q9H8V8 135 aa8.96□□□□□ -0.98
TPM3-216ENST00000473036 NBDYA0A0U1RRE5 68 aa8.95□□□□□ -0.98
TPM3-216ENST00000473036 PHOX2AO14813 284 aa8.95□□□□□ -0.98
TPM3-216ENST00000473036 SCO1O75880 301 aa8.95□□□□□ -0.98
TPM3-216ENST00000473036 MGPP08493 103 aa8.95□□□□□ -0.98
TPM3-216ENST00000473036 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
TPM3-216ENST00000473036 FABP9Q0Z7S8 132 aa8.95□□□□□ -0.98
TPM3-216ENST00000473036 ORMDL3Q8N138 153 aa8.95□□□□□ -0.98
TPM3-216ENST00000473036 GAGE12JA6NER3 117 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 GAGE1Q13065 139 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 GAGE4Q13068 117 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 GAGE5Q13069 117 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 GAGE13Q4V321 117 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 WFDC10BQ8IUB3 73 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 AMN1Q8IY45 258 aa8.94□□□□□ -0.98
TPM3-216ENST00000473036 MRPL18Q9H0U6 180 aaKnown RBP8.94□□□□□ -0.98
TPM3-216ENST00000473036 NIT2Q9NQR4 276 aa8.93□□□□□ -0.98
TPM3-216ENST00000473036 TNFRSF18Q9Y5U5 241 aa8.93□□□□□ -0.98
TPM3-216ENST00000473036 HSPG2P98160 4391 aa8.93□□□□□ -0.98
TPM3-216ENST00000473036 TCAPO15273 167 aa8.92□□□□□ -0.98
TPM3-216ENST00000473036 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
TPM3-216ENST00000473036 MRPL51Q4U2R6 128 aaKnown RBP8.92□□□□□ -0.98
TPM3-216ENST00000473036 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
TPM3-216ENST00000473036 C20orf78Q9BR46 151 aa8.92□□□□□ -0.98
TPM3-216ENST00000473036 M0QY20 66 aa8.91□□□□□ -0.98
TPM3-216ENST00000473036 TIRAPP58753 221 aa8.91□□□□□ -0.98
TPM3-216ENST00000473036 SUMO4Q6EEV6 95 aa8.91□□□□□ -0.98
TPM3-216ENST00000473036 RNF185Q96GF1 192 aa8.91□□□□□ -0.98
TPM3-216ENST00000473036 TRBV6-5A0A0K0K1A5 114 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 SIVA1O15304 175 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 TMEM97Q5BJF2 176 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 OR10J3Q5JRS4 329 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 Q8N3U1 123 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 NEXN-AS1Q8NBZ9 246 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms