RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 PPP1R17O96001 155 aa19.59■□□□□ 0.73
HOXB3-207ENST00000472863 ZFP2Q6ZN57 461 aa19.59■□□□□ 0.73
HOXB3-207ENST00000472863 C20orf78Q9BR46 151 aa19.59■□□□□ 0.73
HOXB3-207ENST00000472863 Q9UF83 564 aa19.59■□□□□ 0.73
HOXB3-207ENST00000472863 MIFP14174 115 aa19.59■□□□□ 0.73
HOXB3-207ENST00000472863 NXT2Q9NPJ8 142 aaKnown RBP19.59■□□□□ 0.73
HOXB3-207ENST00000472863 DEFB130BP0DP73 79 aa19.58■□□□□ 0.72
HOXB3-207ENST00000472863 DEFB130AP0DP74 79 aa19.58■□□□□ 0.72
HOXB3-207ENST00000472863 Q8N8P6 123 aa19.58■□□□□ 0.72
HOXB3-207ENST00000472863 IGHV1-24A0A0C4DH33 117 aa19.57■□□□□ 0.72
HOXB3-207ENST00000472863 SMIM2Q9BVW6 85 aa19.57■□□□□ 0.72
HOXB3-207ENST00000472863 ST20Q9HBF5 79 aa19.57■□□□□ 0.72
HOXB3-207ENST00000472863 FAM222AQ5U5X8 452 aa19.57■□□□□ 0.72
HOXB3-207ENST00000472863 NIT2Q9NQR4 276 aa19.57■□□□□ 0.72
HOXB3-207ENST00000472863 NEGR1Q7Z3B1 354 aa19.55■□□□□ 0.72
HOXB3-207ENST00000472863 LINC00612Q8N6U2 182 aa19.55■□□□□ 0.72
HOXB3-207ENST00000472863 TCAPO15273 167 aa19.55■□□□□ 0.72
HOXB3-207ENST00000472863 EDA2RQ9HAV5 297 aa19.55■□□□□ 0.72
HOXB3-207ENST00000472863 TRBV6-5A0A0K0K1A5 114 aa19.54■□□□□ 0.72
HOXB3-207ENST00000472863 LINC01546A6NGU7 62 aa19.54■□□□□ 0.72
HOXB3-207ENST00000472863 H7C1H1 209 aa19.54■□□□□ 0.72
HOXB3-207ENST00000472863 DEFB121Q5J5C9 76 aa19.54■□□□□ 0.72
HOXB3-207ENST00000472863 POLR2KP53803 58 aaKnown RBP19.53■□□□□ 0.72
HOXB3-207ENST00000472863 SBSPONQ8IVN8 264 aa19.53■□□□□ 0.72
HOXB3-207ENST00000472863 DEFB104AQ8WTQ1 72 aa19.53■□□□□ 0.72
HOXB3-207ENST00000472863 TMEM70Q9BUB7 260 aa19.53■□□□□ 0.72
HOXB3-207ENST00000472863 TP53TG1Q9Y2A0 90 aa19.53■□□□□ 0.72
HOXB3-207ENST00000472863 SDHAF1A6NFY7 115 aa19.53■□□□□ 0.72
HOXB3-207ENST00000472863 DKK2Q9UBU2 259 aa19.53■□□□□ 0.72
HOXB3-207ENST00000472863 A0A096LNJ9 63 aa19.52■□□□□ 0.72
HOXB3-207ENST00000472863 LYRM9A8MSI8 78 aa19.51■□□□□ 0.71
HOXB3-207ENST00000472863 CELA1Q9UNI1 258 aa19.5■□□□□ 0.71
HOXB3-207ENST00000472863 NEXN-AS1Q8NBZ9 246 aa19.49■□□□□ 0.71
HOXB3-207ENST00000472863 SLC25A29Q8N8R3 303 aa19.49■□□□□ 0.71
HOXB3-207ENST00000472863 DNHD1Q96M86 4753 aa19.48■□□□□ 0.71
HOXB3-207ENST00000472863 VCYO14598 125 aa19.48■□□□□ 0.71
HOXB3-207ENST00000472863 RPL32P62910 135 aaKnown RBP19.48■□□□□ 0.71
HOXB3-207ENST00000472863 LINC00173Q6ZV60 143 aa19.48■□□□□ 0.71
HOXB3-207ENST00000472863 LAGE3Q14657 143 aa19.47■□□□□ 0.71
HOXB3-207ENST00000472863 MRAPQ8TCY5 172 aa19.47■□□□□ 0.71
HOXB3-207ENST00000472863 C18orf15Q96N68 181 aa19.47■□□□□ 0.71
HOXB3-207ENST00000472863 TNFRSF18Q9Y5U5 241 aa19.47■□□□□ 0.71
HOXB3-207ENST00000472863 TRBV27A0A0K0K1C4 114 aa19.47■□□□□ 0.71
HOXB3-207ENST00000472863 FHL2Q14192 279 aa19.47■□□□□ 0.71
HOXB3-207ENST00000472863 TRGV4A0A0C4DH28 118 aa19.46■□□□□ 0.71
HOXB3-207ENST00000472863 CIDEAO60543 219 aa19.45■□□□□ 0.7
HOXB3-207ENST00000472863 LEPROTL1O95214 131 aa19.45■□□□□ 0.7
HOXB3-207ENST00000472863 K7EQD1 137 aa19.45■□□□□ 0.7
HOXB3-207ENST00000472863 KRTAP21-3Q3LHN1 58 aa19.45■□□□□ 0.7
HOXB3-207ENST00000472863 HBDP02042 147 aa19.44■□□□□ 0.7
HOXB3-207ENST00000472863 FCER1GP30273 86 aa19.44■□□□□ 0.7
HOXB3-207ENST00000472863 SPART-AS1P0CW21 52 aa19.43■□□□□ 0.7
HOXB3-207ENST00000472863 PYY3Q5JQD4 70 aa19.43■□□□□ 0.7
HOXB3-207ENST00000472863 KIR2DL4Q99706 377 aa19.43■□□□□ 0.7
HOXB3-207ENST00000472863 TENM3Q9P273 2699 aa19.42■□□□□ 0.7
HOXB3-207ENST00000472863 BTF3P20290 206 aaKnown RBP19.42■□□□□ 0.7
HOXB3-207ENST00000472863 KRTDAPP60985 99 aa19.42■□□□□ 0.7
HOXB3-207ENST00000472863 DAD1P61803 113 aa19.42■□□□□ 0.7
HOXB3-207ENST00000472863 DNAJC30Q96LL9 226 aa19.42■□□□□ 0.7
HOXB3-207ENST00000472863 NUDT3O95989 172 aa19.41■□□□□ 0.7
HOXB3-207ENST00000472863 ZNRF2Q8NHG8 242 aa19.41■□□□□ 0.7
HOXB3-207ENST00000472863 TRBV6-4A0A1B0GX49 114 aa19.41■□□□□ 0.7
HOXB3-207ENST00000472863 I3L3M4 83 aa19.41■□□□□ 0.7
HOXB3-207ENST00000472863 ORMDL2Q53FV1 153 aa19.41■□□□□ 0.7
HOXB3-207ENST00000472863 K7EMI3 77 aa19.4■□□□□ 0.7
HOXB3-207ENST00000472863 C3orf79P0CE67 100 aa19.4■□□□□ 0.7
HOXB3-207ENST00000472863 TRBV10-1A0A0K0K1A3 114 aa19.39■□□□□ 0.7
HOXB3-207ENST00000472863 LOC100131303A0A0U1RQF7 123 aa19.39■□□□□ 0.7
HOXB3-207ENST00000472863 TSHBP01222 138 aa19.39■□□□□ 0.69
HOXB3-207ENST00000472863 PHLDA1Q8WV24 401 aaPredicted RBP19.39■□□□□ 0.69
HOXB3-207ENST00000472863 HHLA3Q9XRX5 114 aa19.39■□□□□ 0.69
HOXB3-207ENST00000472863 TRBV7-3A0A075B6L6 115 aa19.38■□□□□ 0.69
HOXB3-207ENST00000472863 IGHV3-38A0A0C4DH36 116 aa19.38■□□□□ 0.69
HOXB3-207ENST00000472863 TM2D3Q9BRN9 247 aa19.38■□□□□ 0.69
HOXB3-207ENST00000472863 GAGE12JA6NER3 117 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 GAGE1Q13065 139 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 GAGE4Q13068 117 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 GAGE5Q13069 117 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 JOSD1Q15040 202 aaPredicted RBP19.37■□□□□ 0.69
HOXB3-207ENST00000472863 GAGE13Q4V321 117 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 HSPB8Q9UJY1 196 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 SPATA25Q9BR10 227 aa19.37■□□□□ 0.69
HOXB3-207ENST00000472863 RPL36AP83881 106 aaKnown RBP19.36■□□□□ 0.69
HOXB3-207ENST00000472863 RPL36ALQ969Q0 106 aaKnown RBP19.36■□□□□ 0.69
HOXB3-207ENST00000472863 RHOHQ15669 191 aa19.35■□□□□ 0.69
HOXB3-207ENST00000472863 CDPF1Q6NVV7 123 aa19.35■□□□□ 0.69
HOXB3-207ENST00000472863 A0A0J9YWU9 116 aa19.34■□□□□ 0.69
HOXB3-207ENST00000472863 LINC00518Q8N0U6 118 aa19.34■□□□□ 0.69
HOXB3-207ENST00000472863 C11orf68Q9H3H3 251 aaKnown RBP19.34■□□□□ 0.69
HOXB3-207ENST00000472863 SCGB1D1O95968 90 aa19.33■□□□□ 0.69
HOXB3-207ENST00000472863 SMIM6P0DI80 62 aa19.33■□□□□ 0.68
HOXB3-207ENST00000472863 CRYBA4P53673 196 aa19.33■□□□□ 0.68
HOXB3-207ENST00000472863 C12orf74Q32Q52 190 aa19.33■□□□□ 0.68
HOXB3-207ENST00000472863 C2orf66Q6UXQ4 117 aa19.33■□□□□ 0.68
HOXB3-207ENST00000472863 PRADC1Q9BSG0 188 aa19.33■□□□□ 0.68
HOXB3-207ENST00000472863 ATP5G1P05496 136 aa19.32■□□□□ 0.68
HOXB3-207ENST00000472863 UBE2D3P61077 147 aa19.32■□□□□ 0.68
HOXB3-207ENST00000472863 UBE2D2P62837 147 aa19.32■□□□□ 0.68
HOXB3-207ENST00000472863 SPATA12Q7Z6I5 190 aa19.32■□□□□ 0.68
HOXB3-207ENST00000472863 TOMM6Q96B49 74 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms