RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 IGHV3-30P01768 117 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 ZFAND6Q6FIF0 208 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 C16orf92Q96LL3 132 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 VPREB3Q9UKI3 123 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 PHLDA3Q9Y5J5 127 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 TSHBP01222 138 aa9.9□□□□□ -0.83
SCAMP4-207ENST00000472442 PLA2G2AP14555 144 aa9.9□□□□□ -0.83
SCAMP4-207ENST00000472442 HERVK_113P61574 105 aa9.9□□□□□ -0.83
SCAMP4-207ENST00000472442 GPHB5Q86YW7 130 aa9.9□□□□□ -0.83
SCAMP4-207ENST00000472442 TEX29Q8N6K0 151 aa9.89□□□□□ -0.83
SCAMP4-207ENST00000472442 TP53TG1Q9Y2A0 90 aa9.89□□□□□ -0.83
SCAMP4-207ENST00000472442 ASIPP42127 132 aa9.88□□□□□ -0.83
SCAMP4-207ENST00000472442 WFDC11Q8NEX6 87 aa9.88□□□□□ -0.83
SCAMP4-207ENST00000472442 C20orf173Q96LM9 149 aa9.88□□□□□ -0.83
SCAMP4-207ENST00000472442 ITPR3Q14573 2671 aa9.88□□□□□ -0.83
SCAMP4-207ENST00000472442 DEFB1P60022 68 aa9.88□□□□□ -0.83
SCAMP4-207ENST00000472442 SLC25A20O43772 301 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 ANXA2RQ3ZCQ2 193 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 RAX2Q96IS3 184 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 PRO1854Q9UHT4 67 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 PDZD2O15018 2839 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 C9JAW5 83 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 EDN2P20800 178 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 RPL39P62891 51 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 TRPT1Q86TN4 253 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 CITED1Q99966 193 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 ZNF702PQ9H963 129 aa9.87□□□□□ -0.83
SCAMP4-207ENST00000472442 CUBNO60494 3623 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 GAGE5Q13069 117 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 GAGE6Q13070 117 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 B5MCH6 92 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 PMVKQ15126 192 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 PAPPA-AS1Q5QFB9 102 aa9.86□□□□□ -0.83
SCAMP4-207ENST00000472442 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 H7C2G1 150 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 J3QKU1 62 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 SOCS3O14543 225 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 GNRH2O43555 120 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 HELZ2Q9BYK8 2649 aaKnown RBP9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 DUX5Q96PT3 197 aa9.85□□□□□ -0.83
SCAMP4-207ENST00000472442 NHLRC4P0CG21 123 aaPredicted RBP9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 AMELXQ99217 191 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 LENEPQ9Y5L5 61 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 A4D1N5 150 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 EIF4EBP3O60516 100 aaPredicted RBP9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 DAZ1Q9NQZ3 744 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 J3QQQ9 107 aa9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 RNASE4P34096 147 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-207ENST00000472442 PPP1R17O96001 155 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 RNASE3P12724 160 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 SRD5A1P18405 259 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 CCDC168Q8NDH2 2452 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 CRLF1O75462 422 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
SCAMP4-207ENST00000472442 AKAP9Q99996 3911 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 SNCGO76070 127 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 IGKV3-7A0A075B6H7 116 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 F6UB75 175 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 RHODO00212 210 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 IGHV3-33P01772 117 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 GAGE2EQ4V326 116 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 JPT2Q9H910 190 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 GAGE2DQ9UEU5 116 aa9.82□□□□□ -0.84
SCAMP4-207ENST00000472442 K7EMT4 169 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 RPL11P62913 178 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 TRAV2A0A0B4J234 112 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 ELANEP08246 267 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 LINC00315P59091 139 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 TMEM141Q96I45 108 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 MED14OSP0DP75 135 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 ZNF876PQ49A33 203 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 KIF25-AS1Q9Y6Z4 181 aa9.81□□□□□ -0.84
SCAMP4-207ENST00000472442 IGHV3-64A0A075B6Q5 118 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 POLR2KP53803 58 aaKnown RBP9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 Q1RN00 199 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 SUMO4Q6EEV6 95 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 Q8N1Y9 231 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 TIMM17AQ99595 171 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 A0A087WWL8 130 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 Q8N2B8 174 aa9.8□□□□□ -0.84
SCAMP4-207ENST00000472442 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms