RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	RPL39L	Q96EH5	51 aa	Known RBP	7.41	□□□□□ -1.22
PUM1-208	ENST00000471894	EDA2R	Q9HAV5	297 aa		7.41	□□□□□ -1.22
PUM1-208	ENST00000471894	TNFRSF18	Q9Y5U5	241 aa		7.41	□□□□□ -1.22
PUM1-208	ENST00000471894	TRAV26-1	A0A087WT03	109 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	TRAV10	A0A0B4J240	114 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894		A0A0J9YY99	117 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	TRBV10-1	A0A0K0K1A3	114 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	NEXN-AS1	Q8NBZ9	246 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	ZNRF2	Q8NHG8	242 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	DNAJC30	Q96LL9	226 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	ST20	Q9HBF5	79 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894		Q9UF83	564 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	LAMTOR2	Q9Y2Q5	125 aa		7.4	□□□□□ -1.22
PUM1-208	ENST00000471894	HUWE1	Q7Z6Z7	4374 aa	Known RBP	7.4	□□□□□ -1.23
PUM1-208	ENST00000471894	DNAH9	Q9NYC9	4486 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	LOC100131303	A0A0U1RQF7	123 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	LOC389332	A0A1B0GUA5	103 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	GAGE12J	A6NER3	117 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	GYPE	P15421	78 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	RPL36A	P83881	106 aa	Known RBP	7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	GAGE1	Q13065	139 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	GAGE4	Q13068	117 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	GAGE5	Q13069	117 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	GAGE13	Q4V321	117 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	RPL36AL	Q969Q0	106 aa	Known RBP	7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	VSIG2	Q96IQ7	327 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	C20orf78	Q9BR46	151 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	MAP1LC3A	Q9H492	121 aa		7.39	□□□□□ -1.23
PUM1-208	ENST00000471894	TRBV7-3	A0A075B6L6	115 aa		7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	TRBV6-5	A0A0K0K1A5	114 aa		7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	RAB5B	P61020	215 aa		7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	SUMO2	P61956	95 aa	Known RBP	7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	PRSS3P2	Q8NHM4	247 aa		7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	C18orf32	Q8TCD1	76 aa		7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	PHLDA1	Q8WV24	401 aa	Predicted RBP	7.38	□□□□□ -1.23
PUM1-208	ENST00000471894	PRKDC	P78527	4128 aa	Known RBP	7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	FBN3	Q75N90	2809 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	SDHAF1	A6NFY7	115 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	PRSS47	A8MTI9	375 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	VCY	O14598	125 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BK	O60814	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BJ	P06899	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	PMCH	P20382	165 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BO	P23527	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BB	P33778	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BD	P58876	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BC	P62807	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST2H2BE	Q16778	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	IQCJ	Q1A5X6	159 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	BAGE3	Q86Y29	109 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BH	Q93079	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BN	Q99877	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	HIST1H2BM	Q99879	126 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	TMEM70	Q9BUB7	260 aa		7.37	□□□□□ -1.23
PUM1-208	ENST00000471894	STAB2	Q8WWQ8	2551 aa		7.36	□□□□□ -1.23
PUM1-208	ENST00000471894		H3BNG1	76 aa		7.36	□□□□□ -1.23
PUM1-208	ENST00000471894	IFI27	P40305	119 aa	Predicted RBP	7.36	□□□□□ -1.23
PUM1-208	ENST00000471894	POLR2K	P53803	58 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-208	ENST00000471894		Q0VG73	95 aa		7.36	□□□□□ -1.23
PUM1-208	ENST00000471894	MRPL23	Q16540	153 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-208	ENST00000471894	ICOS	Q9Y6W8	199 aa		7.36	□□□□□ -1.23
PUM1-208	ENST00000471894		A0A096LPF7	62 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	IGHV3-38	A0A0C4DH36	116 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	IGLL5	B9A064	214 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894		I3L3M4	83 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	NUDT3	O95989	172 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	NDUFA6	P56556	154 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	UBE2D3	P61077	147 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	UBE2D2	P62837	147 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	RPL32	P62910	135 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	FA2H	Q7L5A8	372 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	NEGR1	Q7Z3B1	354 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	DAZ4	Q86SG3	579 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	NIT1	Q86X76	327 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894		Q8N8P6	123 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	ATP6V0E2	Q8NHE4	81 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	DEFB104A	Q8WTQ1	72 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	SMIM2	Q9BVW6	85 aa		7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	NXT2	Q9NPJ8	142 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	DAZ3	Q9NR90	486 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-208	ENST00000471894	TRBV27	A0A0K0K1C4	114 aa		7.34	□□□□□ -1.23
PUM1-208	ENST00000471894	LINC00614	P0C842	121 aa		7.34	□□□□□ -1.23
PUM1-208	ENST00000471894	SH2D6	Q7Z4S9	175 aa		7.34	□□□□□ -1.23
PUM1-208	ENST00000471894	KIR2DL4	Q99706	377 aa		7.34	□□□□□ -1.23
PUM1-208	ENST00000471894	TMA7	Q9Y2S6	64 aa	Known RBP	7.34	□□□□□ -1.23
PUM1-208	ENST00000471894	IGLV2-18	A0A075B6J9	118 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894		J3QL48	77 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	TCAP	O15273	167 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	LINC00694	P0DN24	101 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	FCER1G	P30273	86 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	COTL1	Q14019	142 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	RNASEK	Q6P5S7	137 aa	Known RBP	7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	CEMP1	Q6PRD7	247 aa	Predicted RBP	7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	C15orf53	Q8NAA6	179 aa		7.33	□□□□□ -1.24
PUM1-208	ENST00000471894	NUPR2	A6NF83	97 aa		7.32	□□□□□ -1.24
PUM1-208	ENST00000471894	S100A6	P06703	90 aa		7.32	□□□□□ -1.24
PUM1-208	ENST00000471894	LAGE3	Q14657	143 aa		7.32	□□□□□ -1.24
PUM1-208	ENST00000471894	CHCHD1	Q96BP2	118 aa	Known RBP	7.32	□□□□□ -1.24
PUM1-208	ENST00000471894	WWC2-AS2	Q96NR7	200 aa		7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms