RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.34□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 A6NED7 52 aa10.34□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 RBAKDNA6NC62 111 aa10.34□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 IGLC1P0CG04 106 aa10.33□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 A0A0U1RQV1 116 aa10.33□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 IGKV2D-26A0A0A0MRZ7 120 aa10.33□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 M0R2N4 97 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 FXYD5Q96DB9 178 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 F8W1H4 67 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 ADCYAP1P18509 176 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 SRSF2Q01130 221 aaKnown RBP10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 B5MCH6 92 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 C11orf45Q8TAV5 145 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 PTPRSQ13332 1948 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 DAZ2Q13117 558 aaKnown RBP10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 DAZ4Q86SG3 579 aaKnown RBP10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 DAZ3Q9NR90 486 aaKnown RBP10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 FAM215AQ9Y5M1 114 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 IGF2-ASQ6U949 168 aa10.32□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 IGLL1P15814 213 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 DEFB1P60022 68 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 Q8TCH9 128 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 COX8AP10176 69 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 AGPAT4-IT1Q9H0P7 198 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 K7EP13 123 aa10.31□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 FSHBP01225 129 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 IGFL3Q6UXB1 125 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 V9GYV3 84 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 SPRNQ5BIV9 151 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 LYPD6Q86Y78 171 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 RITA1Q96K30 269 aa10.3□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 TMEM256-PLSCR3K7ERE1 68 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 C12orf74Q32Q52 190 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 LGALS9CQ6DKI2 356 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 BPY2O14599 106 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 Q0VG73 95 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 C20orf78Q9BR46 151 aa10.29□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 SIP14410 1827 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 FAM19A1Q7Z5A9 133 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 ATOX1O00244 68 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 CCL25O15444 150 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 CTSZQ9UBR2 303 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 IGKV1-17P01599 117 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 TMEM14CQ9P0S9 112 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 ZNF462Q96JM2 2506 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 C15orf65H3BRN8 121 aa10.28□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 CTRLP40313 264 aa10.27□□□□□ -0.76
NPHP3-ACAD11-201ENST00000471702 CFC1BP0CG36 223 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 CFC1P0CG37 223 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 Q8N1Y9 231 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 A0A0B4J2C4 111 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 Q6ZS49 121 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 Q6ZVH6 145 aa10.27□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 PROK2Q9HC23 129 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 IGLC7A0M8Q6 106 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 CRYGDP07320 174 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 WI2-2373I1.2A0A1W2PRP0 233 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 CFPP27918 469 aa10.26□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 FGF23Q9GZV9 251 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 A0A0J9YXV3 536 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 ZNF726P1Q15940 193 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 TRAV23DV6A0A075B6W5 121 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 WT1P19544 449 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 LINC00311Q8N616 119 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 HILS1P60008 231 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 CRIPAKQ8N1N5 446 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 LTBP1Q14766 1721 aa10.25□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 IGHV7-81A0A0B4J1V7 117 aa10.24□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 LECT2O14960 151 aa10.24□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 IGLV1-44P01699 117 aa10.24□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 MSRB1Q9NZV6 116 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 ABCA12Q86UK0 2595 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 H0YGX0 51 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 IGLV9-49A0A0B4J1Y8 123 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 H3BUA1 57 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 K7EP34 96 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 NCOR2Q9Y618 2525 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 LY6G6EA0A0G2JKS1 128 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 U3KQA8 63 aa10.23□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 A4D1N5 150 aa10.22□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 SIRPDQ9H106 197 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms