RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TMBIM6P55061 237 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 RAB2AP61019 212 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 SUMO1P63165 101 aaKnown RBP4.28□□□□□ -1.72
HDAC1-204ENST00000471488 COTL1Q14019 142 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 PQLC2Q6ZP29 291 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 NEXN-AS1Q8NBZ9 246 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 IL36BQ9NZH7 164 aa4.28□□□□□ -1.72
HDAC1-204ENST00000471488 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 A0A096LNI7 61 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 MUC21A0A140T8X8 626 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 SERTM2A0A1B0GWG4 89 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 BTCP35070 178 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 RPS10P46783 165 aaKnown RBP4.27□□□□□ -1.73
HDAC1-204ENST00000471488 PCP4P48539 62 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 SAPCD1Q5SSQ6 148 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 Q6ZRP5 223 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 ZFP82Q8N141 532 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 C5orf17Q8NAS9 161 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 NUDT15Q9NV35 164 aa4.27□□□□□ -1.73
HDAC1-204ENST00000471488 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 S100A9P06702 114 aaKnown RBP4.26□□□□□ -1.73
HDAC1-204ENST00000471488 PIK3CD-AS1Q5SR53 167 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 KRTAP26-1Q6PEX3 210 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 PRR26Q8N8Z3 221 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 GFRA4Q9GZZ7 299 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 PRR34Q9NV39 138 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 VAX2Q9UIW0 290 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 EPDR1Q9UM22 224 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 ARL2-SNX15V9GYD0 113 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
HDAC1-204ENST00000471488 IGHV1-24A0A0C4DH33 117 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 KRBOX1C9JBD0 128 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 UBE2L6O14933 153 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 SH2D1AO60880 128 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 MT-ND6P03923 174 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 SMIM17P0DL12 118 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 CDC34P49427 236 aaPredicted RBP4.25□□□□□ -1.73
HDAC1-204ENST00000471488 UBE2G2P60604 165 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 RAB4BP61018 213 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 TMEM97Q5BJF2 176 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 NTM-AS1Q6ZSK4 140 aa4.25□□□□□ -1.73
HDAC1-204ENST00000471488 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 TRAV8-4A0A0B4J246 113 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 TRBV6-1A0A0K0K1D8 114 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 F8W036 122 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 LYRM1O43325 122 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 P01737 135 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 MGPP08493 103 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 H2AFB2P0C5Z0 115 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 IL7P13232 177 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 GCHFRP30047 84 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 ZNF664Q8N3J9 261 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 C15orf56Q8N910 161 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 OR10G8Q8NGN5 311 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 LINC00526Q96FQ7 95 aa4.24□□□□□ -1.73
HDAC1-204ENST00000471488 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 GZMBP10144 247 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
HDAC1-204ENST00000471488 IL15RAQ13261 267 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 FAM162BQ5T6X4 162 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 SPANXN1Q5VSR9 72 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 LINC00299Q6ZSB3 139 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 Q86TA4 180 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 C20orf203Q8NBC4 194 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 AQP10Q96PS8 301 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 SDHCQ99643 169 aaPredicted RBP4.23□□□□□ -1.73
HDAC1-204ENST00000471488 TMEM243Q9BU79 118 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 PSORS1C2Q9UIG4 136 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 HSPB11Q9Y547 144 aa4.23□□□□□ -1.73
HDAC1-204ENST00000471488 H0YIZ8 118 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 PEX7O00628 323 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 TSPAN13O95857 204 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 RPL12P30050 165 aaKnown RBP4.22□□□□□ -1.73
HDAC1-204ENST00000471488 CRIP1P50238 77 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 UBE2D1P51668 147 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 UBE2G1P62253 170 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 INO80EQ8NBZ0 244 aaPredicted RBP4.22□□□□□ -1.73
HDAC1-204ENST00000471488 OR10AG1Q8NH19 301 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 RAB24Q969Q5 203 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 TPPP3Q9BW30 176 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 ZNF471Q9BX82 626 aaPredicted RBP4.22□□□□□ -1.73
HDAC1-204ENST00000471488 TMEM167BQ9NRX6 74 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 LINC00474Q9P2X8 69 aa4.22□□□□□ -1.73
HDAC1-204ENST00000471488 FAM240BA0A1B0GVZ2 78 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 RAB19A4D1S5 217 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 PLA2G10O15496 165 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 CXorf1O96002 111 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 STAG3L2P0CL84 134 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 STAG3L3P0CL85 134 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 RAB4AP20338 218 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 EIF5AP63241 154 aaKnown RBP4.21□□□□□ -1.74
HDAC1-204ENST00000471488 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
HDAC1-204ENST00000471488 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms