RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 DEFB130BP0DP73 79 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 DEFB130AP0DP74 79 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 PMCHP20382 165 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 LINC00310P59036 64 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 Q6ZSN1 163 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 Q8N8P6 123 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 ST20Q9HBF5 79 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 MEGF8Q7Z7M0 2845 aa10.74□□□□□ -0.69
COL4A5-203ENST00000470339 IGLV2-18A0A075B6J9 118 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 TRBV10-1A0A0K0K1A3 114 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 LOC389332A0A1B0GUA5 103 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 TRBV6-4A0A1B0GX49 114 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 K7EMI3 77 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 DEFB4AO15263 64 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 IFI27P40305 119 aaPredicted RBP10.73□□□□□ -0.69
COL4A5-203ENST00000470339 POLR2KP53803 58 aaKnown RBP10.73□□□□□ -0.69
COL4A5-203ENST00000470339 DAD1P61803 113 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 FA2HQ7L5A8 372 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 MRAPQ8TCY5 172 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 URB1-AS1Q96HZ7 61 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 PACRGQ96M98 296 aaPredicted RBP10.73□□□□□ -0.69
COL4A5-203ENST00000470339 SMIM2Q9BVW6 85 aa10.73□□□□□ -0.69
COL4A5-203ENST00000470339 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 VCYO14598 125 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 NUPR1O60356 82 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 FHL2Q14192 279 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 RNASEKQ6P5S7 137 aaKnown RBP10.72□□□□□ -0.69
COL4A5-203ENST00000470339 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 ZMAT4Q9H898 229 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
COL4A5-203ENST00000470339 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
COL4A5-203ENST00000470339 HSBP1O75506 76 aa10.71□□□□□ -0.69
COL4A5-203ENST00000470339 S100A2P29034 98 aa10.71□□□□□ -0.69
COL4A5-203ENST00000470339 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
COL4A5-203ENST00000470339 CELA1Q9UNI1 258 aa10.71□□□□□ -0.69
COL4A5-203ENST00000470339 TNFRSF18Q9Y5U5 241 aa10.71□□□□□ -0.69
COL4A5-203ENST00000470339 K7EQD1 137 aa10.7□□□□□ -0.7
COL4A5-203ENST00000470339 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
COL4A5-203ENST00000470339 TMEM18Q96B42 140 aa10.7□□□□□ -0.7
COL4A5-203ENST00000470339 TENM3Q9P273 2699 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 LOC105371267A0A1B0GV96 52 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 TCAPO15273 167 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 ATP5G1P05496 136 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 RHOHQ15669 191 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
COL4A5-203ENST00000470339 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 P0DMU3 169 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
COL4A5-203ENST00000470339 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
COL4A5-203ENST00000470339 HIST1H2BLQ99880 126 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
COL4A5-203ENST00000470339 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 IFITM10A6NMD0 228 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 I3L3M4 83 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
COL4A5-203ENST00000470339 G0S2P27469 103 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 AMTP48728 403 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 LAGE3Q14657 143 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 C12orf74Q32Q52 190 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 PDZD11Q5EBL8 140 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
COL4A5-203ENST00000470339 CRYBA4P53673 196 aa10.66□□□□□ -0.7
COL4A5-203ENST00000470339 Q9UF83 564 aa10.66□□□□□ -0.7
COL4A5-203ENST00000470339 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
COL4A5-203ENST00000470339 FCER1GP30273 86 aa10.65□□□□□ -0.7
COL4A5-203ENST00000470339 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
COL4A5-203ENST00000470339 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.7
COL4A5-203ENST00000470339 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
COL4A5-203ENST00000470339 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
COL4A5-203ENST00000470339 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
COL4A5-203ENST00000470339 FABP4P15090 132 aa10.64□□□□□ -0.71
COL4A5-203ENST00000470339 UBE2D3P61077 147 aa10.64□□□□□ -0.71
COL4A5-203ENST00000470339 UBE2D2P62837 147 aa10.64□□□□□ -0.71
COL4A5-203ENST00000470339 C11orf45Q8TAV5 145 aa10.64□□□□□ -0.71
COL4A5-203ENST00000470339 HBDP02042 147 aa10.63□□□□□ -0.71
COL4A5-203ENST00000470339 DEFA6Q01524 100 aa10.63□□□□□ -0.71
COL4A5-203ENST00000470339 COL7A1Q02388 2944 aa10.62□□□□□ -0.71
COL4A5-203ENST00000470339 A0A096LNJ9 63 aa10.62□□□□□ -0.71
COL4A5-203ENST00000470339 F5H768 121 aa10.62□□□□□ -0.71
COL4A5-203ENST00000470339 PAX4O43316 350 aa10.62□□□□□ -0.71
COL4A5-203ENST00000470339 TSHBP01222 138 aa10.62□□□□□ -0.71
COL4A5-203ENST00000470339 LINC00694P0DN24 101 aa10.62□□□□□ -0.71
COL4A5-203ENST00000470339 GAGE12JA6NER3 117 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 H3BNG1 76 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 LEPROTL1O95214 131 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 NUDT3O95989 172 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 GAGE1Q13065 139 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 GAGE4Q13068 117 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 GAGE5Q13069 117 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 COTL1Q14019 142 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 PMCHL1Q16048 86 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms