RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 RAB5CP51148 216 aa8.41□□□□□ -1.06
PTPN7-207ENST00000468385 RPL36AP83881 106 aaKnown RBP8.41□□□□□ -1.06
PTPN7-207ENST00000468385 Q86TA4 180 aa8.41□□□□□ -1.06
PTPN7-207ENST00000468385 RPL36ALQ969Q0 106 aaKnown RBP8.41□□□□□ -1.06
PTPN7-207ENST00000468385 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
PTPN7-207ENST00000468385 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
PTPN7-207ENST00000468385 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 RAB19A4D1S5 217 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 PANO1I0J062 215 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 M0R381 172 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 PEX7O00628 323 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 SH2D1AO60880 128 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 CRPP02741 224 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 PRSS1P07477 247 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 SERF2P84101 59 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 MPV17L2Q567V2 206 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 C15orf54Q8N8G6 183 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 ACTR3CQ9C0K3 210 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-207ENST00000468385 PHLDA3Q9Y5J5 127 aa8.4□□□□□ -1.06
PTPN7-207ENST00000468385 HLA-DQA1P01909 254 aa8.39□□□□□ -1.07
PTPN7-207ENST00000468385 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
PTPN7-207ENST00000468385 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
PTPN7-207ENST00000468385 UMAD1C9J7I0 102 aa8.38□□□□□ -1.07
PTPN7-207ENST00000468385 ANGP03950 147 aaKnown RBP8.38□□□□□ -1.07
PTPN7-207ENST00000468385 UBE2G2P60604 165 aa8.38□□□□□ -1.07
PTPN7-207ENST00000468385 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
PTPN7-207ENST00000468385 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
PTPN7-207ENST00000468385 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
PTPN7-207ENST00000468385 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 MIAQ16674 131 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 ZNF674Q2M3X9 581 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 FAM162BQ5T6X4 162 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 KRTAP26-1Q6PEX3 210 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 Q6ZRU5 148 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 HIST1H2BAQ96A08 127 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
PTPN7-207ENST00000468385 FAM74A7A6NL05 159 aa8.36□□□□□ -1.07
PTPN7-207ENST00000468385 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
PTPN7-207ENST00000468385 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
PTPN7-207ENST00000468385 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
PTPN7-207ENST00000468385 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
PTPN7-207ENST00000468385 CTXND1A0A1B0GTU2 59 aa8.35□□□□□ -1.07
PTPN7-207ENST00000468385 RAB4BP61018 213 aa8.35□□□□□ -1.07
PTPN7-207ENST00000468385 FAM213BQ8TBF2 198 aa8.35□□□□□ -1.07
PTPN7-207ENST00000468385 CHCHD5Q9BSY4 110 aa8.35□□□□□ -1.07
PTPN7-207ENST00000468385 NKX6-2Q9C056 277 aaPredicted RBP8.35□□□□□ -1.07
PTPN7-207ENST00000468385 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 PKIAP61925 76 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
PTPN7-207ENST00000468385 PEA15Q15121 130 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 ZNF56Q15929 161 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 LYPD6BQ8NI32 183 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 FMC1Q96HJ9 113 aa8.34□□□□□ -1.07
PTPN7-207ENST00000468385 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
PTPN7-207ENST00000468385 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
PTPN7-207ENST00000468385 LTAP01374 205 aa8.33□□□□□ -1.08
PTPN7-207ENST00000468385 RBX1P62877 108 aa8.33□□□□□ -1.08
PTPN7-207ENST00000468385 APOC3P02656 99 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 FHITP49789 147 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 UBE2G1P62253 170 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 CNBPP62633 177 aaKnown RBP8.32□□□□□ -1.08
PTPN7-207ENST00000468385 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 CLRN3Q8NCR9 226 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 EIF5A2Q9GZV4 153 aaKnown RBP8.32□□□□□ -1.08
PTPN7-207ENST00000468385 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
PTPN7-207ENST00000468385 F8W036 122 aa8.31□□□□□ -1.08
PTPN7-207ENST00000468385 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
PTPN7-207ENST00000468385 GAGE6Q13070 117 aa8.31□□□□□ -1.08
PTPN7-207ENST00000468385 TMEM97Q5BJF2 176 aa8.31□□□□□ -1.08
PTPN7-207ENST00000468385 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.31□□□□□ -1.08
PTPN7-207ENST00000468385 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
PTPN7-207ENST00000468385 A0A1B0GV50 99 aa8.3□□□□□ -1.08
PTPN7-207ENST00000468385 DERL1Q9BUN8 251 aa8.3□□□□□ -1.08
PTPN7-207ENST00000468385 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 A0A087WYN8 130 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 SNAI2O43623 268 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 SLPIP03973 132 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 CXCL1P09341 107 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 REG3AQ06141 175 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
PTPN7-207ENST00000468385 SEC11CQ9BY50 192 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 SMDT1Q9H4I9 107 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 KIF25-AS1Q9Y6Z4 181 aa8.29□□□□□ -1.08
PTPN7-207ENST00000468385 TRBV25-1A0A075B6N4 114 aa8.28□□□□□ -1.08
PTPN7-207ENST00000468385 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
PTPN7-207ENST00000468385 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms