RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 HIST1H2BBP33778 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST1H2BDP58876 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST1H2BCP62807 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST2H2BEQ16778 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.76□□□□□ -1.65
SND1-205ENST00000467238 GOLT1AQ6ZVE7 132 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST1H2BHQ93079 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST1H2BNQ99877 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 HIST1H2BMQ99879 126 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 TXNDC17Q9BRA2 123 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 RPH3ALQ9UNE2 315 aa4.76□□□□□ -1.65
SND1-205ENST00000467238 A0A087WTM6 91 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 LOC100131303A0A0U1RQF7 123 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 A0A1W2PPV4 95 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 F6UZH7 168 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 STAG3L2P0CL84 134 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 STAG3L3P0CL85 134 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 ARL14EPLP0DKL9 152 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 FABP4P15090 132 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 GATA1P15976 413 aaPredicted RBP4.75□□□□□ -1.65
SND1-205ENST00000467238 EVI2AP22794 236 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 XGP55808 180 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 GNG5P63218 68 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 COTL1Q14019 142 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 TMEM241Q24JQ0 296 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 OR4C5Q8NGB2 326 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 OR2G3Q8NGZ4 309 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 IMMP2LQ96T52 175 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 SDF2L1Q9HCN8 221 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 MSRB1Q9NZV6 116 aa4.75□□□□□ -1.65
SND1-205ENST00000467238 SERTM2A0A1B0GWG4 89 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 C9JQL5 133 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 TNFRSF6BO95407 300 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 CRYGDP07320 174 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 SRP19P09132 144 aaKnown RBP4.74□□□□□ -1.65
SND1-205ENST00000467238 TRGC1P0CF51 173 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 CDC34P49427 236 aaPredicted RBP4.74□□□□□ -1.65
SND1-205ENST00000467238 RPL19P84098 196 aaKnown RBP4.74□□□□□ -1.65
SND1-205ENST00000467238 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 KCNIP4Q6PIL6 250 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 C10orf126Q8N4M7 172 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 C5orf17Q8NAS9 161 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 OR10G9Q8NGN4 311 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 OR10G7Q8NGN6 311 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 FAM213BQ8TBF2 198 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 KCNS1Q96KK3 526 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 SGK494Q96LW2 274 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 HIST1H2BLQ99880 126 aa4.74□□□□□ -1.65
SND1-205ENST00000467238 IGHV3-38A0A0C4DH36 116 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 FBLL1A6NHQ2 334 aaKnown RBP4.73□□□□□ -1.65
SND1-205ENST00000467238 IFITM10A6NMD0 228 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 EPM2AB3EWF7 344 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 PHOX2AO14813 284 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 DLEU1O43261 78 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 IGLV2-11P01706 119 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 TCRAP04437 139 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 AKR1C3P42330 323 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 ZNF80P51504 273 aaPredicted RBP4.73□□□□□ -1.65
SND1-205ENST00000467238 KRTAP10-1P60331 282 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 LINC01556Q5JQF7 62 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 SLC25A29Q8N8R3 303 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 NHLRC2Q8NBF2 726 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 NDFIP1Q9BT67 221 aa4.73□□□□□ -1.65
SND1-205ENST00000467238 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
SND1-205ENST00000467238 TRAV9-1A0A075B6T8 112 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 GGTLC3B5MD39 225 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 TMEM250H0YL14 139 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 RS1O15537 224 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 CIDEAO60543 219 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 TRGC2P03986 189 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 PFN1P07737 140 aaKnown RBP4.72□□□□□ -1.65
SND1-205ENST00000467238 GZMBP10144 247 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 ATP6V0CP27449 155 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 GCHFRP30047 84 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 PCP4P48539 62 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 SERF2P84101 59 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 RHOHQ15669 191 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 ZNF876PQ49A33 203 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 PET117Q6UWS5 81 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 TMEM75Q8N9X5 138 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 OR2D3Q8NGH3 330 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 C9orf85Q96MD7 179 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 NAT8Q9UHE5 227 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 PSG8Q9UQ74 426 aa4.72□□□□□ -1.65
SND1-205ENST00000467238 XKRY2A2RUG3 117 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 LRCOL1A6NCL2 159 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 IBA57-AS1B1ANH7 110 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 K7EQM0 130 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 RNASE3P12724 160 aaKnown RBP4.71□□□□□ -1.66
SND1-205ENST00000467238 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
SND1-205ENST00000467238 COX19Q49B96 90 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 COL5A1-AS1Q5SY13 56 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 Q5VSD8 79 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 ZNF664Q8N3J9 261 aa4.71□□□□□ -1.66
SND1-205ENST00000467238 CYB561D1Q8N8Q1 229 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms