RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 RPS10P46783 165 aaKnown RBP9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 RNASE8Q8TDE3 154 aaKnown RBP9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 PGLYRP4Q96LB8 373 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 TPPP3Q9BW30 176 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 TRGV11A0A075B6L2 103 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 A0A1B0GUT8 65 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 ZNF324O75467 553 aaPredicted RBP9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 MT-ND6P03923 174 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 HTN1P15515 57 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 CTRLP40313 264 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 HBBP68871 147 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 RIGQ13278 110 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 TDRG1Q3Y452 100 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 ANXA2RQ3ZCQ2 193 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 MUC21Q5SSG8 566 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 C11orf21Q9P2W6 132 aa9.89□□□□□ -0.83
HMGXB4-206ENST00000466438 IGHV1OR15-1A0A075B7D0 117 aa9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 K7EP13 123 aa9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 IGLC6P0CF74 106 aa9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 KIR3DS1Q14943 382 aa9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 MRPL54Q6P161 138 aaKnown RBP9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
HMGXB4-206ENST00000466438 GRIFINA4D1Z8 144 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 LRCOL1A6NCL2 159 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 SPINK4O60575 86 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 OR5AL1P0C617 328 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 CACNG7P62955 275 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 LINC00467Q9BRT7 94 aa9.87□□□□□ -0.83
HMGXB4-206ENST00000466438 GAGE12BA1L429 117 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 C1orf196B1AJZ1 125 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 SNAI2O43623 268 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 GAGE7O76087 117 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 RAB4BP61018 213 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 Q8N814 137 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 GNB1LQ9BYB4 327 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 KRTAP9-2Q9BYQ4 174 aa9.86□□□□□ -0.83
HMGXB4-206ENST00000466438 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 SNURFLB1AK76 121 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 H3BVH4 76 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 RAB5BP61020 215 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 Q6ZQT7 251 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 CNFNQ9BYD5 112 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 TRAPPC1Q9Y5R8 145 aa9.85□□□□□ -0.83
HMGXB4-206ENST00000466438 RS1O15537 224 aa9.84□□□□□ -0.83
HMGXB4-206ENST00000466438 CAMPP49913 170 aa9.84□□□□□ -0.83
HMGXB4-206ENST00000466438 SPANXN1Q5VSR9 72 aa9.84□□□□□ -0.83
HMGXB4-206ENST00000466438 SMIM15Q7Z3B0 74 aa9.84□□□□□ -0.83
HMGXB4-206ENST00000466438 SSBP4Q9BWG4 385 aaPredicted RBP9.84□□□□□ -0.83
HMGXB4-206ENST00000466438 PHLDA3Q9Y5J5 127 aa9.84□□□□□ -0.83
HMGXB4-206ENST00000466438 PSCAO43653 123 aa9.83□□□□□ -0.84
HMGXB4-206ENST00000466438 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
HMGXB4-206ENST00000466438 TWIST1Q15672 202 aa9.83□□□□□ -0.84
HMGXB4-206ENST00000466438 ZFP82Q8N141 532 aa9.83□□□□□ -0.84
HMGXB4-206ENST00000466438 IGHV3-16A0A0C4DH30 117 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 GNRH2O43555 120 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 TRGC2P03986 189 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 TRGC1P0CF51 173 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 EVI2AP22794 236 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 TMEM136Q6ZRR5 245 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 SCXQ7RTU7 201 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 GATD1Q8NB37 220 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 ICOSQ9Y6W8 199 aa9.82□□□□□ -0.84
HMGXB4-206ENST00000466438 TNXBP22105 4242 aa9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 RNASE3P12724 160 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 NTF3P20783 257 aa9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 FABP9Q0Z7S8 132 aa9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 OR10AG1Q8NH19 301 aa9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 TMA7Q9Y2S6 64 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-206ENST00000466438 APCSP02743 223 aa9.8□□□□□ -0.84
HMGXB4-206ENST00000466438 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
HMGXB4-206ENST00000466438 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
HMGXB4-206ENST00000466438 AP1S3Q96PC3 154 aa9.8□□□□□ -0.84
HMGXB4-206ENST00000466438 TP53TG3Q9ULZ0 132 aa9.8□□□□□ -0.84
HMGXB4-206ENST00000466438 MUC21A0A0G2JKD1 596 aa9.79□□□□□ -0.84
HMGXB4-206ENST00000466438 MUC21A0A140T8X8 626 aa9.79□□□□□ -0.84
HMGXB4-206ENST00000466438 M0R381 172 aa9.79□□□□□ -0.84
HMGXB4-206ENST00000466438 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
HMGXB4-206ENST00000466438 SPXQ9BT56 116 aa9.79□□□□□ -0.84
HMGXB4-206ENST00000466438 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
HMGXB4-206ENST00000466438 KRTAP9-6A0A140TA67 174 aa9.78□□□□□ -0.84
HMGXB4-206ENST00000466438 SSTP61278 116 aa9.78□□□□□ -0.84
HMGXB4-206ENST00000466438 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
HMGXB4-206ENST00000466438 PAX4O43316 350 aa9.77□□□□□ -0.85
HMGXB4-206ENST00000466438 CRYGDP07320 174 aa9.77□□□□□ -0.85
HMGXB4-206ENST00000466438 SMIM17P0DL12 118 aa9.77□□□□□ -0.85
HMGXB4-206ENST00000466438 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-206ENST00000466438 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms